BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22530 (UTR included)
(1705 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01027B2A11 1374 0.0
BF01026A2F11 396 e-110
>BF01027B2A11
Length = 697
Score = 1374 bits (693), Expect = 0.0
Identities = 696/697 (99%)
Strand = Plus / Plus
Query: 356 atttgatatcgttgcatcataccataacgatattgactatttattagtttgagtgatccg 415
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 atttgatatcgttgcatcataccataacgatcttgactatttattagtttgagtgatccg 60
Query: 416 agtggatactgttttctgtcagtccgaattgtgataatcttatattttgtgcagtgtact 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agtggatactgttttctgtcagtccgaattgtgataatcttatattttgtgcagtgtact 120
Query: 476 aacgtgcgacaagaattttgacaagatggctccaactattcacactttcatcaatagttt 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aacgtgcgacaagaattttgacaagatggctccaactattcacactttcatcaatagttt 180
Query: 536 tcaaaatcgactagaaccaccagtgcgtcaacatcttaagaatgtttatggcacactcat 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcaaaatcgactagaaccaccagtgcgtcaacatcttaagaatgtttatggcacactcat 240
Query: 596 gatgacatgtggggcagcttcggccggagtgtatgttgacatatacacacggttccaggc 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gatgacatgtggggcagcttcggccggagtgtatgttgacatatacacacggttccaggc 300
Query: 656 tggaattctttcagcccttgtaggtgctggtctcatgctaatgctgattgctacaccaga 715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tggaattctttcagcccttgtaggtgctggtctcatgctaatgctgattgctacaccaga 360
Query: 716 caatggaaaaaatactcaattaagactcggctatctgctaggatttggtttaacatcagg 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caatggaaaaaatactcaattaagactcggctatctgctaggatttggtttaacatcagg 420
Query: 776 aatgggcttgggacctctgatggagtatgtcagcattgtggacccctccattataatgac 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aatgggcttgggacctctgatggagtatgtcagcattgtggacccctccattataatgac 480
Query: 836 agctttaatgggcacaacattagtgtttgtgtgtttctccgttgctgccatgctagctga 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agctttaatgggcacaacattagtgtttgtgtgtttctccgttgctgccatgctagctga 540
Query: 896 acgtggcagctggttattcttgggcggcacactgatgaccttgctaacatctatgtcttt 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acgtggcagctggttattcttgggcggcacactgatgaccttgctaacatctatgtcttt 600
Query: 956 gatgaccctagtcaatcttttcatgcaatcacatatcttataccaaacacatctgtacct 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gatgaccctagtcaatcttttcatgcaatcacatatcttataccaaacacatctgtacct 660
Query: 1016 tggactcatgttaatgtgtggctttgtgctctttgat 1052
|||||||||||||||||||||||||||||||||||||
Sbjct: 661 tggactcatgttaatgtgtggctttgtgctctttgat 697
>BF01026A2F11
Length = 278
Score = 396 bits (200), Expect = e-110
Identities = 206/208 (99%)
Strand = Plus / Plus
Query: 1140 ttcagaagactggtgattatccttacacaaaaagaagagcagaaccgccgccgtaaacgt 1199
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37 ttcataagactggtgattatccttacacaaaaagaagagcagaaccgccgccgtaaacgt 96
Query: 1200 gattagacataatgtcaatatttcataaggtttggagtgttgggaaaattaactgtacca 1259
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 97 gattagacataatgtcaatatttcataaggtttggagtattgggaaaattaactgtacca 156
Query: 1260 tattattcttcttattttattttataattgtgttaaaggtatccagaaatttataatgtt 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 tattattcttcttattttattttataattgtgttaaaggtatccagaaatttataatgtt 216
Query: 1320 cagaacataaaataaatcaaaaacccaa 1347
||||||||||||||||||||||||||||
Sbjct: 217 cagaacataaaataaatcaaaaacccaa 244
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 273,945
Number of extensions: 6147
Number of successful extensions: 6147
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6147
Number of HSP's successfully gapped: 2
Length of query: 1705
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1688
Effective length of database: 8,119,229
Effective search space: 13705258552
Effective search space used: 13705258552
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)