BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22552 (UTR included)
(1849 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01051A2A07 1471 0.0
>BF01051A2A07
Length = 774
Score = 1471 bits (742), Expect = 0.0
Identities = 766/774 (98%)
Strand = Plus / Plus
Query: 429 tgattatttattatttttgaaactctatttattttttaggaaatgaattcttaaacctaa 488
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 1 tgattatttattatttttgaaactctatttatttttttgcaaatgaattcttaaacctaa 60
Query: 489 gtgtaggcgacaatgattcccttatatgtcaataaaggcgtcgcttatgtttggaatgcg 548
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 61 gtgtaggcgacaatgattcccttatatgtcaataaaggcgttgcttatgtttggaatgct 120
Query: 549 gatgattggtttactctacgaactactcatcgaatatgtggtgctctaataggatcactt 608
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatgattggcatactctacgaactactcatcgaatatgtggtgctctaataggatcactt 180
Query: 609 cccccctttcctcgccagaatgattttcaaggcttaccaatggctttaatgtcagtggag 668
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cccccgtttcctcgccagaatgattttcaaggcttaccaatggctttaatgtcagtggag 240
Query: 669 gctgcgtttttagttgaaaaaggtatctgtgagctaatagaattgcctaacataaatgat 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gctgcgtttttagttgaaaaaggtatctgtgagctaatagaattgcctaacataaatgat 300
Query: 729 gaactatctccagcacagaagcaacagataaaaaaaatggaagagggaatatttaaagat 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaactatctccagcacagaagcaacagataaaaaaaatggaagagggaatatttaaagat 360
Query: 789 cagagcaaagccatgcataagaaaagagtagatcagatgtcacagaagattgatataatt 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cagagcaaagccatgcataagaaaagagtagatcagatgtcacagaagattgatataatt 420
Query: 849 gttgctggcaaagtacagaaactaaaggccaaaggaaaaactgatcttgaaattgacaaa 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gttgctggcaaagtacagaaactaaaggccaaaggaaaaactgatcttgaaattgacaaa 480
Query: 909 gaagctttattaaaggaggaaataagtaaattaccgattttgtcacctaattatgccttg 968
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 481 gaagctttattaaaggaggaaataagtaaattaccgattttgtcacctaattacgccttg 540
Query: 969 gtacatttaccaactgaacattacatagatacagtgaaaagaaaagtgcaaataaatatt 1028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtacatttaccaactgaacattacatagatacagtgaaaagaaaagtgcaaataaatatt 600
Query: 1029 ctacaaccaagtattttggaccaagtaggatctattcactatgcaatatataaagactta 1088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ctacaaccaagtattttggaccaagtaggatctattcactatgcaatatataaagactta 660
Query: 1089 tgggagaaggggcattacatcactaatggtttaaattttggatcagagtttcttgtttat 1148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgggagaaggggcattacatcactaatggtttaaattttggatcagagtttcttgtttat 720
Query: 1149 cctggagatccagtgaaatttcatgcatcttacatggtgcgatgtatcaacaat 1202
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cctggagatccagtgaaatttcatgcatcttacatggtgcgatgtatcaacaat 774
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 283,053
Number of extensions: 5507
Number of successful extensions: 5507
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5507
Number of HSP's successfully gapped: 1
Length of query: 1849
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1832
Effective length of database: 8,119,229
Effective search space: 14874427528
Effective search space used: 14874427528
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)