BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22563 (UTR included)
(1603 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2A02 1150 0.0
BF01039A2A11 343 5e-94
>BF01047B2A02
Length = 814
Score = 1150 bits (580), Expect = 0.0
Identities = 589/592 (99%)
Strand = Plus / Plus
Query: 926 aacgggcatgattaagaccctgactctcatttaccgtgagaacggtatagtgaagggctt 985
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 aacggggatgattaagaccctgactctcatttaccgtgagaacggtatagtgaagggctt 282
Query: 986 gtatcgagggatgacagttaactacatccgcgccataccgatggtggcgacgtctttctc 1045
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 283 gtatcgagggatgacagttaactacatccgcgccataccgatggtggcgacatctttctc 342
Query: 1046 cacgtacgagctgatgaagcagttactccacctcgatactggcatgaaaatatcataacc 1105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 cacgtacgagctgatgaagcagttactccacctcgatactggcatgaaaatatcataacc 402
Query: 1106 accgtaacagtattatagtttgttatttcgtagtgaagttttcatcactaatttatttat 1165
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 403 accgtaacagtattatagtttgttatttcgtagtgaagttttcatcactaaattatttat 462
Query: 1166 tatctgttcatgtcccgctctatattgtctctgggttaggagggtattgttattttaagg 1225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tatctgttcatgtcccgctctatattgtctctgggttaggagggtattgttattttaagg 522
Query: 1226 ttaaaatgtttatgttcacgcctaggatggggtctaaagtataaaattttctcgtcgatg 1285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ttaaaatgtttatgttcacgcctaggatggggtctaaagtataaaattttctcgtcgatg 582
Query: 1286 cacaagatattgtttaatatgtcaaattattgcatatgagttaatatagtggtaagtgga 1345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 cacaagatattgtttaatatgtcaaattattgcatatgagttaatatagtggtaagtgga 642
Query: 1346 agctactgtctgttttgtatattttgatttatttttatatgatgttcgtggaccatgtgt 1405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 agctactgtctgttttgtatattttgatttatttttatatgatgttcgtggaccatgtgt 702
Query: 1406 gaacagacaaataaaaatatttttgggatagtaataaaaatctattatttttatatgaat 1465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 gaacagacaaataaaaatatttttgggatagtaataaaaatctattatttttatatgaat 762
Query: 1466 gtgtgtcggctctctgtatatttgaattgtatttagtatagtcatatacata 1517
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 gtgtgtcggctctctgtatatttgaattgtatttagtatagtcatatacata 814
Score = 125 bits (63), Expect = 2e-28
Identities = 63/63 (100%)
Strand = Plus / Plus
Query: 863 ctactgcttcgagtccctcaaattcctctgcatgaagtatctaccgagttcactttgtaa 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctactgcttcgagtccctcaaattcctctgcatgaagtatctaccgagttcactttgtaa 60
Query: 923 gaa 925
|||
Sbjct: 61 gaa 63
>BF01039A2A11
Length = 786
Score = 343 bits (173), Expect = 5e-94
Identities = 182/185 (98%)
Strand = Plus / Plus
Query: 596 gtatctcagcgggttaagcgtgcctctagttcagcatggtgataagttcgtggctggtgc 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gtatctcagcgggttaagcgtgcctctagttcagcatggtgataagttcgtggctggtgc 661
Query: 656 tggcgccggtgtgaccgcggtgaccttgacttaccccctggatacaataagagctcgtct 715
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct: 662 tggcgccggtgtgaccgcggtgaccctgacttaccccctggatacaataagagctcgcct 721
Query: 716 ggcgttccaagtgactggcgagcacaggtacaacggcatcgtagacgccgctacaaccat 775
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ggcgttccaagtgaccggcgagcacaggtacaacggcatcgtagacgccgctacaaccat 781
Query: 776 attta 780
|||||
Sbjct: 782 attta 786
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 203,196
Number of extensions: 4212
Number of successful extensions: 4212
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4210
Number of HSP's successfully gapped: 3
Length of query: 1603
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1586
Effective length of database: 8,119,229
Effective search space: 12877097194
Effective search space used: 12877097194
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)