BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22567 (UTR included)
(2230 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01034A1E07 1427 0.0
>BF01034A1E07
Length = 736
Score = 1427 bits (720), Expect = 0.0
Identities = 732/736 (99%)
Strand = Plus / Plus
Query: 537 ggtgttccaatattttcaagaaaacgcggtagtaatgaaaatattcaattttctactata 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtgttccaatattttcaagaaaacgcggtagtaatgaaaatattcaattttctactata 60
Query: 597 gcgtcacttcatgggataaatatgttcacaaaatgtcacaacctctctttaattaataca 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcgtcacttcatgggataaatatgttcacaaaatgtcacaacctctctttaattaataca 120
Query: 657 caccttgataatggaacaataatttggaaggagtattgtaaaagtattactttaatagga 716
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 121 caccttgataatggaacaataatttggaaggaggattgtaaaagtattactttaatagga 180
Query: 717 atagctacgggtggactacaatgtgaccttgaaaatctattggcctgtatacatgatgta 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atagctacgggtggactacaatgtgaccttgaaaatctattggcctgtatacatgatgta 240
Query: 777 atgatattttgtattggcaaaaaagagttggaaaatttaaaaaatgttgaccaaatcaaa 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgatattttgtattggcaaaaaagagttggaaaatttaaaaaatgttgaccaaatcaaa 300
Query: 837 agagacttgaggcagtgttatccaattctagattacttgttggaatctctagatccaaat 896
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 301 agagacttgaggcagtgttatccaattctagattacttgttggaatctttagatccaaat 360
Query: 897 tcattgccacagtccacaatcatcctagattatattcaaagtcttctttgtcctcaggct 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcattgccacagtccacaatcatcctagattatattcaaagtcttctttgtcctcaggct 420
Query: 957 caacagttgcaggaagttttggacaactatgcgcagactgtaacaggaaggtgggcttgt 1016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caacagttgcaggaagttttggacaactatgcgcagactgtaacaggaaggtgggcttgt 480
Query: 1017 cttagcattcatggtcatttggttgccacaagttctgacttctctgagttagatgcaaga 1076
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cttagcattcacggtcatttggttgccacaagttctgacttctctgagttagatgcaaga 540
Query: 1077 gaagccaaattactcttattattagcagcggctcaagatggagccccattaagagatacc 1136
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaagctaaattactcttattattagcagcggctcaagatggagccccattaagagatacc 600
Query: 1137 ttggtgtatttgccacaaatgagtccaaatgtagcattccgggctgtaacatgcaaactt 1196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttggtgtatttgccacaaatgagtccaaatgtagcattccgggctgtaacatgcaaactt 660
Query: 1197 ttagcagatgtctatgtgctagttatctgtggagcgactcctccgctgtcagaaatagat 1256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttagcagatgtctatgtgctagttatctgtggagcgactcctccgctgtcagaaatagat 720
Query: 1257 gaaatagtccttcgat 1272
||||||||||||||||
Sbjct: 721 gaaatagtccttcgat 736
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 294,551
Number of extensions: 6380
Number of successful extensions: 6380
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6380
Number of HSP's successfully gapped: 1
Length of query: 2230
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2213
Effective length of database: 8,119,229
Effective search space: 17967853777
Effective search space used: 17967853777
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)