BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22568 (UTR included)
(2236 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_963_C1 452 e-126
>BF14_963_C1
Length = 1195
Score = 452 bits (228), Expect = e-126
Identities = 228/228 (100%)
Strand = Plus / Plus
Query: 1986 gttaaacaaatagcggagttggaggtcggattactaacgcaatgcataaaagagttcaca 2045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 gttaaacaaatagcggagttggaggtcggattactaacgcaatgcataaaagagttcaca 164
Query: 2046 gcaaaagctaagatgagcgatcaaaccatacgtaatatacttttaaaggttaattcaaaa 2105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 gcaaaagctaagatgagcgatcaaaccatacgtaatatacttttaaaggttaattcaaaa 224
Query: 2106 ctgatgggtgtgaaccaagcattggacgcgtcatccataccgaggtgcatcagtgaaggc 2165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 ctgatgggtgtgaaccaagcattggacgcgtcatccataccgaggtgcatcagtgaaggc 284
Query: 2166 ggtgttatgttggttggcgctgacgtcactcacccctcccctgatcag 2213
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ggtgttatgttggttggcgctgacgtcactcacccctcccctgatcag 332
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 263,488
Number of extensions: 4172
Number of successful extensions: 4172
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4172
Number of HSP's successfully gapped: 1
Length of query: 2236
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2219
Effective length of database: 8,119,229
Effective search space: 18016569151
Effective search space used: 18016569151
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)