BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22570 (UTR included)
(1462 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1928_C1 654 0.0
>BF14_1928_C1
Length = 1835
Score = 654 bits (330), Expect = 0.0
Identities = 351/358 (98%)
Strand = Plus / Minus
Query: 1105 tcgctcacaaacaaatctttaagttatggaacgacttggaaaaaaactagtttgtttgct 1164
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 1835 tcgctcacaaacaaatctttaagctatggaacgacttggacaaaaactagtttgtttgct 1776
Query: 1165 cttgatttatccatcgaagcggtgtatttccaacgggattatttgtcgttttttgtcaac 1224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1775 cttgatttatccatcgaagcggtgtatttccaacgggattatttgtcgttttttgtcaac 1716
Query: 1225 gcttcttgagaagctgatgttgtttttgtttacgatgaatttttgtagattaccgttatt 1284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1715 gcttcttgagaagctgatgttgtttttgtttacgatgaatttttgtagattaccgttatt 1656
Query: 1285 attcttcactacaataaataaacttgacattcaaacttgatattacacaattggatgtct 1344
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 1655 attcttcactacaataaataaacttgacattctaacttgatattacacaattggatctct 1596
Query: 1345 atttttcctactacaagaataaatatgtacgtttaatgaaagagacgaacattgttaaca 1404
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 1595 atttttcctactacaagaataaatatatacatttaatgaaagagacgaacattgttaaca 1536
Query: 1405 aattataaatttttattgcaattaatagtaatcaataaataattttcattcattcttc 1462
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1535 aattatacatttttattgcaattaatagtaatcaataaataattttcattcattcttc 1478
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 197,880
Number of extensions: 3966
Number of successful extensions: 3966
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3966
Number of HSP's successfully gapped: 1
Length of query: 1462
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1445
Effective length of database: 8,119,229
Effective search space: 11732285905
Effective search space used: 11732285905
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)