BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22575 (UTR included)
(2311 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2H03 252 2e-66
BF01060B1D11 248 3e-65
BF01056B1D01 86 3e-16
>BF01047B2H03
Length = 758
Score = 252 bits (127), Expect = 2e-66
Identities = 303/358 (84%), Gaps = 14/358 (3%)
Strand = Plus / Minus
Query: 104 gatgagtctagaaaggtcatcggagctctataaacacctaagagtttgcaaaagatatat 163
|||||||||| ||||| |||||||||||||||||||| ||||||||| ||| ||| ||||
Sbjct: 758 gatgagtctaaaaaggccatcggagctctataaacacttaagagtttccaagagacatat 699
Query: 164 cctggggaaatcccatgatgacgtcattacatccctcccaaaagaaaaagatgccctaga 223
|| ||||||| ||||| |||| ||||||||||| ||| ||||| | | |||||||| ||
Sbjct: 698 cccggggaaagcccataatgatgtcattacatcactctcaaaaaatagagatgcccctga 639
Query: 224 gctagagttaagacttcaatcccataagcagtttatgataggagcacaaagtaa-tagag 282
||| ||| ||||||||||| |||||| |||||||||||||||||||||||||| ||||
Sbjct: 638 actaaagtcaagacttcaattccataaacagtttatgataggagcacaaagtaacgagag 579
Query: 283 tagggttaggatcaagcaagaaggcccaa------gatatattgaagtcttttattcagc 336
|||| ||||||||||| |||||||||||| |||||||||||||||||||||| ||
Sbjct: 578 taggattaggatcaaggaagaaggcccaagatacggatatattgaagtcttttattcggc 519
Query: 337 aagaggagaatgataaatataagatccatgctgcaattagtttagagatgcagaaagtgt 396
|||| ||||||||| |||||| ||||| |||||| |||||||| |||||||| | ||
Sbjct: 518 aagacgagaatgatggatataacatcca---tgcaatgagtttagatatgcagaacgagt 462
Query: 397 ggtgagccatag-gagaattttgcaacccattagcacaaaaatggcgcaccttaattc 453
||| || ||||| |||| || || ||||||||| ||||||||||||||||||||
Sbjct: 461 ggttagacatagagaga---ttccattccattagcaataaaatggcgcaccttaattc 407
Score = 81.8 bits (41), Expect = 5e-15
Identities = 68/77 (88%)
Strand = Plus / Minus
Query: 554 aacttgctatatctgtgaggaagcagttggaactgctaagcatttgctggtggaatgtaa 613
||||||||||||||| ||||| |||||||||| |||| ||||||||||| ||| |||||
Sbjct: 365 aacttgctatatctgcgaggaggcagttggaattgctgagcatttgctgatgggatgtag 306
Query: 614 gggactcctggatagcg 630
| ||||||||||||||
Sbjct: 305 gctactcctggatagcg 289
>BF01060B1D11
Length = 799
Score = 248 bits (125), Expect = 3e-65
Identities = 338/404 (83%), Gaps = 15/404 (3%)
Strand = Plus / Minus
Query: 58 catcggctgattcatcagctttattcagggatcgcaataattttgagatgagtctagaaa 117
||||| ||||| | || |||||| | ||||||||||||| ||||| |||||||||| |||
Sbjct: 633 catcgactgatacgtcggctttaattagggatcgcaatagttttgggatgagtctaaaaa 574
Query: 118 ggtcatcggagctctataaacacctaagagtttgcaaaagatatatcctggggaaatccc 177
|| |||||||||||||||||||| ||||||||| ||| ||| |||||| ||||||| |||
Sbjct: 573 ggccatcggagctctataaacacttaagagtttccaagagacatatcccggggaaagccc 514
Query: 178 atgatgacgtcattacatccctcccaaaagaaaaagatgccctagagctagagt-taaga 236
|| |||| ||||||||||| ||||||||| ||||| || ||| ||| ||| | |||
Sbjct: 513 ataatgatgtcattacatcactcccaaaaaccggagatggcccagaactaaagtctgaga 454
Query: 237 cttcaatcccataagcagtttatgataggagcacaaagtaa-tagagtagggttaggatc 295
||||||| ||| || |||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 453 cttcaattccacaaacagtttatgataggagcacaaagtaacgagagtaggattaggatc 394
Query: 296 aagcaagaaggcccaa------gatatattgaagtcttttattcagcaagaggagaatga 349
||| |||||||| ||| ||||||||||||| ||||||||||||||| ||||||||
Sbjct: 393 aaggaagaaggctcaagatatggatatattgaagtattttattcagcaagacgagaatga 334
Query: 350 taaatataagatccatgctgcaattagtttagagatgcagaaagtgtggtgagccatag- 408
| |||||||||||| |||||| |||||||||||||||| | ||||| || |||||
Sbjct: 333 tggatataagatcca---tgcaatgcgtttagagatgcagaacgagtggttagacataga 277
Query: 409 gagaattttgcaacccattagcacaaaaatggcgcaccttaatt 452
|||| || || ||||||||| |||||||||||||||||||
Sbjct: 276 gaga---ttccattccattagcaataaaatggcgcaccttaatt 236
Score = 83.8 bits (42), Expect = 1e-15
Identities = 94/110 (85%), Gaps = 6/110 (5%)
Strand = Plus / Minus
Query: 508 tcccagatcagagtaatttagtaagatggga-----aaaaataactgaaaaaacttgcta 562
|||||||||||||||||||||||||| |||| ||| ||| | ||||||||||||||
Sbjct: 234 tcccagatcagagtaatttagtaagacgggaggggtaaagatacc-gaaaaaacttgcta 176
Query: 563 tatctgtgaggaagcagttggaactgctaagcatttgctggtggaatgta 612
||| || ||| | |||||||||| |||||||||||||||| ||| |||||
Sbjct: 175 tatttgcgagaaggcagttggaattgctaagcatttgctgatgggatgta 126
>BF01056B1D01
Length = 838
Score = 85.7 bits (43), Expect = 3e-16
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 475 taaaattttatctcaatgcgttccaaatgactctcccagatcagagtaatttagtaaga 533
||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 117 taaaattttatcttgatgcgttccaaatgactcttccaaatcagagtaatttagtaaga 59
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 241,740
Number of extensions: 4082
Number of successful extensions: 4082
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4079
Number of HSP's successfully gapped: 8
Length of query: 2311
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2294
Effective length of database: 8,119,229
Effective search space: 18625511326
Effective search space used: 18625511326
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)