BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22579 (UTR included)
(3133 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01042A2E03 452 e-126
BF01048B1E10 343 1e-93
>BF01042A2E03
Length = 755
Score = 452 bits (228), Expect = e-126
Identities = 232/234 (99%)
Strand = Plus / Plus
Query: 2461 ttaactatgctcagaacattggcatggcgtcagtaattagtctcatgttagtttccgtta 2520
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 ttaactatgctcagaacattggcatggcgtcnntaattagtctcatgttagtttccgtta 60
Query: 2521 tactgtgggcgagttttcgtttgaggtataagagaagacagctacgagctttgaatactg 2580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tactgtgggcgagttttcgtttgaggtataagagaagacagctacgagctttgaatactg 120
Query: 2581 atatggaggaccaaatagaagtgtcaaatatatcgggtggagtgttgtggtgacatcttc 2640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atatggaggaccaaatagaagtgtcaaatatatcgggtggagtgttgtggtgacatcttc 180
Query: 2641 gtgcagccgatccaacgccctttgaatatgattcactcttaacgtagcaatcat 2694
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtgcagccgatccaacgccctttgaatatgattcactcttaacgtagcaatcat 234
Score = 232 bits (117), Expect = 3e-60
Identities = 117/117 (100%)
Strand = Plus / Plus
Query: 3017 tgggtggcaatcggctgcagtcagttggattatttgtgataaatcttaacgtacatattt 3076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 tgggtggcaatcggctgcagtcagttggattatttgtgataaatcttaacgtacatattt 294
Query: 3077 ttctatgaaataagtacaaatagagagctattctaagcaaattggttagattttatc 3133
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ttctatgaaataagtacaaatagagagctattctaagcaaattggttagattttatc 351
>BF01048B1E10
Length = 765
Score = 343 bits (173), Expect = 1e-93
Identities = 173/173 (100%)
Strand = Plus / Plus
Query: 2961 ttccagtacataatttaaacattgttgacaaatgaaataattttataatttttcagtggg 3020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttccagtacataatttaaacattgttgacaaatgaaataattttataatttttcagtggg 60
Query: 3021 tggcaatcggctgcagtcagttggattatttgtgataaatcttaacgtacatatttttct 3080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggcaatcggctgcagtcagttggattatttgtgataaatcttaacgtacatatttttct 120
Query: 3081 atgaaataagtacaaatagagagctattctaagcaaattggttagattttatc 3133
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgaaataagtacaaatagagagctattctaagcaaattggttagattttatc 173
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 435,688
Number of extensions: 8557
Number of successful extensions: 8557
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8557
Number of HSP's successfully gapped: 3
Length of query: 3133
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3115
Effective length of database: 8,109,745
Effective search space: 25261855675
Effective search space used: 25261855675
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)