BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22584 (UTR included)
(2668 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01048B2H12 1578 0.0
>BF01048B2H12
Length = 800
Score = 1578 bits (796), Expect = 0.0
Identities = 799/800 (99%)
Strand = Plus / Plus
Query: 676 cagatttacttgactgcacccaagaggctccgttacctttaagtctaaatgaagagaagg 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagatttacttgactgcacccaagaggctccgttacctttaagtctaaatgaagagaagg 60
Query: 736 gcaaatatggctcggaagactgtttatacatggaagtgaactccccgaacataacaccaa 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcaaatatggctcggaagactgtttatacatggaagtgaactccccgaacataacaccaa 120
Query: 796 ataaacccatgccagtcatgttctggattggtagttgtaactatgcttactatattgatc 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ataaacccatgccagtcatgttctggattggtagttgtaactatgcttactatattgatc 180
Query: 856 agttgtacgattccacatcaatcgtgaatgaaagtgttgtgtttgttagatgcggtttca 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agttgtacgattccacatcaatcgtgaatgaaagtgttgtgtttgttagatgcggtttca 240
Query: 916 gattgggaccgatgggttttctttctataaacgagtttagtgctcccggtaacattggat 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gattgggaccgatgggttttctttctataaacgagtttagtgctcccggtaacattggat 300
Query: 976 tgaaggatatagtcatggccctgaagtggactcaaactaatatcagcgtatttggtggag 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgaaggatatagtcatggccctgaagtggactcaaactaatatcagcgtatttggtggag 360
Query: 1036 atccgaataatgttacgatatttggttcgagcacgggcggtgccacagtacactatatga 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atccgaataatgttacgatatttggttcgagcacgggcggtgccacagtacactatatga 420
Query: 1096 tgatatcaccaatggccgttggattgttccataaagccataatgcagagttccacagccc 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgatatcaccaatggccgttggattgttccataaagccataatgcagagttccacagccc 480
Query: 1156 tcaataaattttccttaaataagaacccaactcaagctgctattgacctagctgaaaaat 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcaataaattttccttaaataagaacccaactcaagctgctattgacctagctgaaaaat 540
Query: 1216 taggtataacgactgcaaacaaatttgacatggtcgacgaactgaaaaaagtacctgccc 1275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 taggtataacgactgcaaacaaatttgacatggtcgacgaactgaaaaaagtacctgccc 600
Query: 1276 gcgatataatggaagcgtacaaaaaaatatcagataaatcaatatctaacgacgatggta 1335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gcgatataatggaagcgtacaaaaaaatatcagataaatcaatatctaacgacgatggta 660
Query: 1336 aactttttgacgttctgtttaggccttgcgtagaaaaagaatttgaaggtatgccgacat 1395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aactttttgacgttctgtttaggccttgcgtagaaaaagaatttgaaggtatgccgacat 720
Query: 1396 ttctcagcaaaacccccagccaaatcctaaaatctggtacctttaacaaggtccctatca 1455
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 721 ttctcagcaaaacccccagccaaatcctaaaatctggtacctttaacaaggtccctatta 780
Query: 1456 taatcggatgcaacaacatc 1475
||||||||||||||||||||
Sbjct: 781 taatcggatgcaacaacatc 800
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 360,119
Number of extensions: 6856
Number of successful extensions: 6856
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6856
Number of HSP's successfully gapped: 1
Length of query: 2668
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2651
Effective length of database: 8,119,229
Effective search space: 21524076079
Effective search space used: 21524076079
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)