BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22615 (UTR included)
(1531 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2364_C1 1324 0.0
>BF14_2364_C1
Length = 921
Score = 1324 bits (668), Expect = 0.0
Identities = 719/731 (98%), Gaps = 4/731 (0%)
Strand = Plus / Plus
Query: 529 ataaagaattgcgtcttctactgttaggtttggataatgctggaaaaacgactctcttaa 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ataaagaattgcgtcttctactgttaggtttggataatgctggaaaaacgactctcttaa 252
Query: 589 aacaattggcatctgaggatgtgtctcatgtgaccccgacagcaggattcaatataaaat 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 aacaattggcatctgaggatgtgtctcatgtgaccccgacagcaggattcaatataaaat 312
Query: 649 ctgttttatctaatggctttaaattaaatgtatgggatatcggtggacaaagaaaaatac 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ctgttttatctaatggctttaaattaaatgtatgggatatcggtggacaaagaaaaatac 372
Query: 709 ggccctattggaggaattattttgagaatactgatattttgatatatgtggtagattgtt 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ggccctattggaggaattattttgagaatactgatattttgatatatgtggtagattgtt 432
Query: 769 ctgatcacgtccgtctggaagaaactagtcaggaattggctgaattgttgcaagatgaca 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ctgatcacgtccgtctggaagaaactagtcaggaattggctgaattgttgcaagatgaca 492
Query: 829 agttacgaggggtgccactgttggtatacgctaataagcaggatttagctacggcgttgc 888
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 493 agttacgaggggtgccactgttggtatacgctaacaagcaggatttagctacggcgttgc 552
Query: 889 ccgcgagcgatgtggctacacacttgggcctccatctaatcagggatcgtacttggcaga 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ccgcgagcgatgtggctacacacttgggcctccatctaatcagggatcgtacttggcaga 612
Query: 949 tacaagcctgtgttgctacagacggtactggtgtaaaggaaggcatggaatgggtctgta 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tacaagcctgtgttgctacagacggtactggtgtaaaggaaggcatggaatgggtctgta 672
Query: 1009 agaacatcccggtgaagaagtaatattttttttaggtagcgaattcatataaaattattg 1068
||||||||||||||||||||||||||| | || |||| ||||||||||||||||||||
Sbjct: 673 agaacatcccggtgaagaagtaatattgtattattgtagtgaattcatataaaattattg 732
Query: 1069 cttactctaatattgtacaattatattaatgttcaagtatttattttttgattaatttct 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 cttactctaatattgtacaattatattaatgttcaagtatttattttttgattaatttct 792
Query: 1129 aatttatataacgttttattgttttaaataatgaaaaa-aggaagcaatactctccgtcc 1187
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 793 aatttatataacgttttattgttttaaataatgaaaaannggaagcaatactctccgtcc 852
Query: 1188 acagtaaggctata-ttttttagcttaaataatgattagcttaaaaatgaattatcttca 1246
|||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 853 acagtaaggctatatttttttagcttaaat-atgattagctt-aaaatgaattatcttca 910
Query: 1247 catttatctag 1257
|||||||||||
Sbjct: 911 catttatctag 921
Score = 287 bits (145), Expect = 3e-77
Identities = 151/153 (98%)
Strand = Plus / Plus
Query: 287 aacaaaagatctgtcacgaagtttgaattacctttgagttgataattactacggttaata 346
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aacaaaacatctgtcacgaagtttgaattacctttgagttgataattactacggttaata 60
Query: 347 tttaattatgttatacagcgcttagttattattaataaattgctttcttacataagtgtc 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttaattatgttatacagcgcttagttattattaataaattgctttcttacataagtgtc 120
Query: 407 tggaacagttgtgattaacttgacttaatatgg 439
||||||||||||||||||||| |||||||||||
Sbjct: 121 tggaacagttgtgattaacttaacttaatatgg 153
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 269,006
Number of extensions: 7072
Number of successful extensions: 7072
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7067
Number of HSP's successfully gapped: 2
Length of query: 1531
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1514
Effective length of database: 8,119,229
Effective search space: 12292512706
Effective search space used: 12292512706
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)