BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22620 (UTR included)
(2026 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2489_C1 1485 0.0
>BF14_2489_C1
Length = 769
Score = 1485 bits (749), Expect = 0.0
Identities = 764/769 (99%)
Strand = Plus / Plus
Query: 467 ttcatgcgtttattgcagtatttttaatgaaataatgtgtgatattaacgataatccaat 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcatgcgtttattgcagtatttttaatgaaataatgtgtgatattaacgataatccaat 60
Query: 527 taaattaagtgtaaaatggaatggaaaggagtatgaaataccagaactatcaccttcgga 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taaattaagtgtaaaatggaatggaaaggagtatgaaataccagaactatcaccttcgga 120
Query: 587 ttctgtggcaatgttaaaaattgccatcgaaaatgctactggcgtgcgaccggaaagaca 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttctgtggcaatgttaaaaattgccatcgaaaatgctactggcgtgcgaccggaaagaca 180
Query: 647 aaaacttctcaatgtaaaatttcagggtaaagtcgcgaccgataattgtacactctccga 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaaacttctcaatgtaaaatttcagggtaaagtcgcgaccgataattgtacactctccga 240
Query: 707 tctaaacctcaaaccgaatctgaagattatgatggtgggttctcttgaagaggcaataga 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tctaaacctcaaaccgaatctgaagattatgatggtgggttctcttgaagaggcaataga 300
Query: 767 aggtgctagaaccaaaccagacgtcggagatgatgttgtcaatgatcttgacatagagga 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggtgctagaaccaaaccagacgtcggagatgatgttgtcaatgatcttgacatagagga 360
Query: 827 agaagaagtcgatgttgaaaaccaagagatttacttagctaaaataaataaacgaataag 886
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agaagaagttgatgttgaaaaccaagagatttacttagctaaaataaataaacgaataag 420
Query: 887 ggattacaagataaatgtactgaatgaaccgcgaccgggcaagaaactattagttctaga 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggattacaagataaatgtactgaatgaaccgcgaccgggcaagaaactattagttctaga 480
Query: 947 tatagattacacactttttgatcacagatctgttgctgagacgggttacgagttaatgcg 1006
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 481 tatagattacacactttttgatcatagatctgttgctgagacgggttacgagttaatgcg 540
Query: 1007 tcccttcctgcatgaatttctaacgtcttcatatacgcattacgatatagtcatctggtc 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcccttcctgcatgaatttctaacgtcttcatatacgcattacgatatagtcatctggtc 600
Query: 1067 ggccaccggtatgaagtggattgaagagaagatgagattgctcggagtatccacacacca 1126
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 601 ggccaccggtatgaagtggattgaggagaagatgagattgctcggagtatccacacacca 660
Query: 1127 ggactacaagattatgttctatttggactatctagctatgattacggtccatacaaccaa 1186
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 661 ggattacaagattatgttctatttggactatctagctatgattacagtccatacaaccaa 720
Query: 1187 gtatgggactatagatgtcaaacctctgggggttatttggggtaaatat 1235
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtatgggactatagatgtcaaacctctgggggttatttggggtaaatat 769
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 420,353
Number of extensions: 28776
Number of successful extensions: 28776
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 28775
Number of HSP's successfully gapped: 1
Length of query: 2026
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2009
Effective length of database: 8,119,229
Effective search space: 16311531061
Effective search space used: 16311531061
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)