BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22630 (UTR included)
(3985 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056A1C05 1178 0.0
BF01054A2A06 811 0.0
BF01057B2A06 511 e-144
>BF01056A1C05
Length = 775
Score = 1178 bits (594), Expect = 0.0
Identities = 606/610 (99%)
Strand = Plus / Plus
Query: 2039 cgccaattatcgcggacggaagtttaagaagagcgacatcctgcaagggaataggagtct 2098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 cgccaattatcgcggacggaagtttaagaagagcgacatcctgcaagggaataggagtct 225
Query: 2099 tacattcgaaggtgtagcgactttgatgcaaggtaggagtaaaatgcagacgctcctagt 2158
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 226 tacattcgaaggtgtagcgactttgatgcaaggcaggagtaaaatgcagacgctcctagt 285
Query: 2159 gatagtgttgacggacgtgttgttcttccttcacgacaacaacaacaaatacactttctt 2218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gatagtgttgacggacgtgttgttcttccttcacgacaacaacaacaaatacactttctt 345
Query: 2219 cacgcctgacaataagactggtgtagtatctctatggaagttgttagttcgcgagaaggc 2278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 cacgcctgacaataagactggtgtagtatctctatggaagttgttagttcgcgagaaggc 405
Query: 2279 cggagccgacggccgaggcctgtacctcatatgtagcgggccgcctggacccgaaatgtt 2338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 cggagccgacggccgaggcctgtacctcatatgtagcgggccgcctggacccgaaatgtt 465
Query: 2339 cgaactaagagttcatcgacccaaagacatcgctcaatggatacgggctatacgaggggc 2398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 cgaactaagagttcatcgacccaaagacatcgctcaatggatacgggctatacgaggggc 525
Query: 2399 agttcaaagctgtcccgaagaaatagaagaatctgaagctgggagtaccgtgacgtcagc 2458
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 agttcaaagctgtccagaagaaatagaagaatctgaagctgggagtaccgtgacgtcagc 585
Query: 2459 agaagagagacagaaacagttggaggcgaggcatgagaatataagactgattacagaggc 2518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 agaagagagacagaaacagttggaggcgaggcatgagaatataagactgattacagaggc 645
Query: 2519 tttgagggcaaaggacagagagcaggcgcaattgttggaagagaaaatggtgttgcatat 2578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 tttgagggcaaaggacagagagcaggcgcaattgttggaagagaaaatggtgttgcatat 705
Query: 2579 gaggatggtcggacacaccgggagttccgccttagatgtacccagcacaggtgtgccccc 2638
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 706 gaggatggtcggacacaccgggagttccgcattagatgttcccagcacaggtgtgccccc 765
Query: 2639 ctgtcccggg 2648
||||||||||
Sbjct: 766 ctgtcccggg 775
Score = 319 bits (161), Expect = 2e-86
Identities = 167/169 (98%)
Strand = Plus / Plus
Query: 521 gtcacggccagtacgacattcaactcactcgttgaatgacaacgatttagctaaggagtt 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcacggccagtacgacattcaactcactcgttgaatgacaacgatttagctaaggagtt 60
Query: 581 cgagaaggtaactgcagcattacgtgctgccgctgacaccagctccagcagactgctgcc 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgagaaggtaactgcagcattacgtgctgccgctgacaccagctccagcagactgctgcc 120
Query: 641 acgtctgccgctgcagaagtccgtctccacaccgagcatcgtggccgcc 689
|||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 121 acgtctgccgctgcagaagtccgtctccacgccgagcatcgtcgccgcc 169
>BF01054A2A06
Length = 791
Score = 811 bits (409), Expect = 0.0
Identities = 415/417 (99%)
Strand = Plus / Plus
Query: 3150 ctgaggcacgcacaggcgaggctcacggcggagagggcggcctgggaggcgcagaggacg 3209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgaggcacgcacaggcgaggctcacggcggagagggcggcctgggaggcgcagaggacg 60
Query: 3210 gccgacagggacgcgctggaacatgatcgtagacaactacaggcagcgcgaaaggagctg 3269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gccgacagggacgcgctggaacatgatcgtagacaactacaggcagcgcgaaaggagctg 120
Query: 3270 gaggaacaacagaaagacgttgaacaacagagagaaaggctctacaggcgcctggagaga 3329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaggaacaacagaaagacgttgaacaacagagagaaaggctctacaggcgcctggagaga 180
Query: 3330 ttacaacaacacggtggcggatctcaagaggaaatagctagcgttggaactctgtcgcct 3389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttacaacaacacggtggcggatctcaagaggaaatagctagcgttggaactctgtcgcct 240
Query: 3390 gattcaagtgtcagcgataccaacagaaggaaagaaccaaaatggagaaataaccgcggt 3449
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 241 gattcaagtgtcagcgataccaacagaaggaaagaaccaaaatggagaaataacctcggt 300
Query: 3450 tcaaccggctcggagtcgtcgttgagcgcctgcagcgtccgcggcgctgcactgccaccg 3509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcaaccggctcggagtcgtcgttgagcgcctgcagcgtccgcggcgctgcactgccaccg 360
Query: 3510 ccacagctgctgtcggcgcacaacgagacgagagccacagcgcgcgctccggtacag 3566
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 361 ccacagctgctgtcggcgcacaacgagacgagagccacagcgcgcgcgccggtacag 417
>BF01057B2A06
Length = 763
Score = 511 bits (258), Expect = e-144
Identities = 267/270 (98%)
Strand = Plus / Plus
Query: 2245 tatctctatggaagttgttagttcgcgagaaggccggagccgacggccgaggcctgtacc 2304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 tatctctatggaagttgttagttcgcgagaaggccggagccgacggccgaggcctgtacc 69
Query: 2305 tcatatgtagcgggccgcctggacccgaaatgttcgaactaagagttcatcgacccaaag 2364
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 tcatatgtagcgggccacctggacccgaaatgttcgaactaagagttcatcgacccaaag 129
Query: 2365 acatcgctcaatggatacgggctatacgaggggcagttcaaagctgtcccgaagaaatag 2424
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 130 acatcgctcaatggatacgggctatacgaggtgcagttcaaagctgtccagaagaaatag 189
Query: 2425 aagaatctgaagctgggagtaccgtgacgtcagcagaagagagacagaaacagttggagg 2484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 aagaatctgaagctgggagtaccgtgacgtcagcagaagagagacagaaacagttggagg 249
Query: 2485 cgaggcatgagaatataagactgattacag 2514
||||||||||||||||||||||||||||||
Sbjct: 250 cgaggcatgagaatataagactgattacag 279
Score = 89.7 bits (45), Expect = 3e-17
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 2513 agaggctttgagggcaaaggacagagagcaggcgcaattgttgga 2557
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 agaggctttgagggcaaaggacagagagcaggcgcaattgttgga 763
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 321,994
Number of extensions: 5333
Number of successful extensions: 5333
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 5333
Number of HSP's successfully gapped: 5
Length of query: 3985
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3967
Effective length of database: 8,109,745
Effective search space: 32171358415
Effective search space used: 32171358415
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)