BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22644 (UTR included)
(1777 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_902_C1 789 0.0
BF01047B2H03 194 3e-49
BF01060B1D11 178 2e-44
>BF14_902_C1
Length = 741
Score = 789 bits (398), Expect = 0.0
Identities = 398/398 (100%)
Strand = Plus / Plus
Query: 1 aaaaaggaaaaggtgacagtgaaaataaggttgaaaccaacgaactatggggtgattact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 aaaaaggaaaaggtgacagtgaaaataaggttgaaaccaacgaactatggggtgattact 403
Query: 61 ctccatacatatcatatgaaggagttgaagctatttatacagatcctaataacaaacaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ctccatacatatcatatgaaggagttgaagctatttatacagatcctaataacaaacaaa 463
Query: 121 aatacacatggaataaggaatcaaactcatgggtccccaaaggagaacccgagggtcgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 aatacacatggaataaggaatcaaactcatgggtccccaaaggagaacccgagggtcgta 523
Query: 181 catatagttatgaaaatgacactcacatttacacagaatcagatggctctaaattctttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 catatagttatgaaaatgacactcacatttacacagaatcagatggctctaaattctttt 583
Query: 241 gggatgatgagaaaaaagcttggattcctaaagtcgatgatgactttcttgctttatacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gggatgatgagaaaaaagcttggattcctaaagtcgatgatgactttcttgctttatacc 643
Query: 301 aaatgtcctacggttttgttgataacacatcagtaaagaatgaagatcaggttaaattga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 aaatgtcctacggttttgttgataacacatcagtaaagaatgaagatcaggttaaattga 703
Query: 361 aggaagagaggaaaaaactagacgctggtgtgaaaaga 398
||||||||||||||||||||||||||||||||||||||
Sbjct: 704 aggaagagaggaaaaaactagacgctggtgtgaaaaga 741
>BF01047B2H03
Length = 758
Score = 194 bits (98), Expect = 3e-49
Identities = 152/168 (90%), Gaps = 4/168 (2%)
Strand = Plus / Minus
Query: 1447 ttaggatcaagtaagaaggttcaagatacggatatattgaagtcttttattcggcaagac 1506
||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ttaggatcaaggaagaaggcccaagatacggatatattgaagtcttttattcggcaagac 514
Query: 1507 gagaatgataaatataagattcatgcaataagtttagaaatgcagaacgagtggttagac 1566
||||||||| |||||| || |||||||| |||||||| |||||||||||||||||||||
Sbjct: 513 gagaatgatggatataacatccatgcaatgagtttagatatgcagaacgagtggttagac 454
Query: 1567 atag-gagatttttgcatcccattagcactaaaatggcgcaccttaat 1613
|||| |||| || ||| ||||||||| |||||||||||||||||||
Sbjct: 453 atagagaga---ttccattccattagcaataaaatggcgcaccttaat 409
>BF01060B1D11
Length = 799
Score = 178 bits (90), Expect = 2e-44
Identities = 150/168 (89%), Gaps = 4/168 (2%)
Strand = Plus / Minus
Query: 1447 ttaggatcaagtaagaaggttcaagatacggatatattgaagtcttttattcggcaagac 1506
||||||||||| ||||||| |||||||| |||||||||||||| |||||||| |||||||
Sbjct: 401 ttaggatcaaggaagaaggctcaagatatggatatattgaagtattttattcagcaagac 342
Query: 1507 gagaatgataaatataagattcatgcaataagtttagaaatgcagaacgagtggttagac 1566
||||||||| ||||||||| |||||||| ||||||| |||||||||||||||||||||
Sbjct: 341 gagaatgatggatataagatccatgcaatgcgtttagagatgcagaacgagtggttagac 282
Query: 1567 atag-gagatttttgcatcccattagcactaaaatggcgcaccttaat 1613
|||| |||| || ||| ||||||||| |||||||||||||||||||
Sbjct: 281 atagagaga---ttccattccattagcaataaaatggcgcaccttaat 237
Score = 87.7 bits (44), Expect = 6e-17
Identities = 93/109 (85%), Gaps = 4/109 (3%)
Strand = Plus / Minus
Query: 1670 tcccagatcagagtaatttagtaaga----tggggtaaaggtaccgaaaagacttgctat 1725
|||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||
Sbjct: 234 tcccagatcagagtaatttagtaagacgggaggggtaaagataccgaaaaaacttgctat 175
Query: 1726 atctgtgggaaggcagttggaactgctaggcacttgttagtgggatgta 1774
|| || | |||||||||||||| ||||| ||| ||| | |||||||||
Sbjct: 174 atttgcgagaaggcagttggaattgctaagcatttgctgatgggatgta 126
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 205,247
Number of extensions: 4281
Number of successful extensions: 4281
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4279
Number of HSP's successfully gapped: 4
Length of query: 1777
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1760
Effective length of database: 8,119,229
Effective search space: 14289843040
Effective search space used: 14289843040
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)