BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22647 (UTR included)
(2158 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01045B1C02 1598 0.0
>BF01045B1C02
Length = 829
Score = 1598 bits (806), Expect = 0.0
Identities = 816/821 (99%)
Strand = Plus / Plus
Query: 232 gtcaccgagttcgacgcaacatcatagcctaaaaccaattacgtagaagcaaaataagct 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 gtcaccgagttcgacgcaacatcatagcctaaaaccaattacgtagaagcaaaataagct 68
Query: 292 gcataatcatctattgggatcatcagaacgttttagttaattgttcagttgagtgtaaca 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 gcataatcatctattgggatcatcagaacgttttagttaattgttcagttgagtgtaaca 128
Query: 352 gatttgtagttcacctgtgggacgagatcatatcttaagtccagtgatgctcttcctggt 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 gatttgtagttcacctgtgggacgagatcatatcttaagtccagtgatgctcttcctggt 188
Query: 412 ctttaattttatcggccgcgactttgactcgagtgcctgatggtgtggaaattatgtgcg 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ctttaattttatcggccgcgactttgactcgagtgcctgatggtgtggaaattatgtgcg 248
Query: 472 aataaaaaaatagtacagagggactcagcatgggggcctttttaaacaagcccgaaacta 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aataaaaaaatagtacagagggactcagcatgggggcctttttaaacaagcccgaaacta 308
Query: 532 agaagtacaacgagagtggcgaaggtaacggactacgctatggcgtggcgtcgatgcagg 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 agaagtacaacgagagtggcgaaggtaacggactacgctatggcgtggcgtcgatgcagg 368
Query: 592 gctggcgcatggagatggaagatgctcatcatgcgcagcttactttaaacggtacattat 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gctggcgcatggagatggaagatgctcatcatgcgcagcttactttaaacggtacattat 428
Query: 652 cggactggtcatatttcggcgtatttgatggccacgcgggggccaaggtgtcagcacact 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 cggactggtcatatttcggcgtatttgatggccacgcgggggccaaggtgtcagcacact 488
Query: 712 gtgccgaaaatttgctggaatgtatcttgcagaccgaagaatttcggagagacgatatag 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gtgccgaaaatttgctggaatgtatcttgcagaccgaagaatttcggagagacgatatag 548
Query: 772 tggaggcgattcgtactggtttcctagatctcgacatgaaaatgcgagaattgccggaac 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tggaggcgattcgtactggtttcctagatctcgacatgaaaatgcgagaattgccggaac 608
Query: 832 tttctaacggcgcggagaagtcaggttcgacagcggtatgcgcttttgtctcaccaaagc 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tttctaacggcgcggagaagtcaggttcgacagcggtatgcgcttttgtctcaccaaagc 668
Query: 892 agatatacatagcaaattgtggcgattcgcgcgcggttttggcacggaacggtgctccga 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 agatatacatagcaaattgtggcgattcgcgcgcggttttggcacggaacggtgctccga 728
Query: 952 tttttgcaactcgggatcataagccggagctgccatctgagaagtctcgtatcgtccagg 1011
||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 729 tttttgcaactcgggatcataagccggnnctgccatctgnnnagtctcgtatcgtccagg 788
Query: 1012 ctggaggttcggtcatgatacatcgtgtcaacggcagtctg 1052
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 ctggaggttcggtcatgatacatcgtgtcaacggcagtctg 829
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 217,755
Number of extensions: 3519
Number of successful extensions: 3519
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3519
Number of HSP's successfully gapped: 1
Length of query: 2158
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2141
Effective length of database: 8,119,229
Effective search space: 17383269289
Effective search space used: 17383269289
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)