BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22648 (UTR included)
(1573 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2703_C1 1737 0.0
>BF14_2703_C1
Length = 1044
Score = 1737 bits (876), Expect = 0.0
Identities = 879/880 (99%)
Strand = Plus / Plus
Query: 422 aggttcagttcgacaaagaatcatgatgttttgacttgcttgtttcgaatcattccaata 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 aggttcagttcgacaaagaatcatgatgttttgacttgcttgtttcgaatcattccaata 224
Query: 482 taaagttaaaaatataaaaatggcaagatattttgaaaacacgacaacattcaacttcag 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 taaagttaaaaatataaaaatggcaagatattttgaaaacacgacaacattcaacttcag 284
Query: 542 ctgggatcaagtcgcacgcggatactggaagagatatccaaacccccagagtacacatgt 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ctgggatcaagtcgcacgcggatactggaagagatatccaaacccccagagtacacatgt 344
Query: 602 actatcagaagacacctggagtcggcacgtgaaggacggatgtttgtatacaaagaggct 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 actatcagaagacacctggagtcggcacgtgaaggacggatgtttgtatacaaagaggct 404
Query: 662 gttgacaaagactaatagagtgcccaagtggggtgaaagatttttcaatgcaaaatctgt 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gttgacaaagactaatagagtgcccaagtggggtgaaagatttttcaatgcaaaatctgt 464
Query: 722 gaaaattattgaagagagtattgttgatccagaaaagaagattttaataacatacactag 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gaaaattattgaagagagtattgttgatccagaaaagaagattttaataacatacactag 524
Query: 782 gaacttgggatacaccaaggtcatgagtgttgtggagcgtgtggagtatcgtccgggggt 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 525 gaacttgggatacaccaaggtcatgagtgttgtggagcgtgtggagtatcgtccgggagt 584
Query: 842 gtctggtacaacagtggctcgccgttcagcctgggttgactcacaggtgtttggtttctc 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 gtctggtacaacagtggctcgccgttcagcctgggttgactcacaggtgtttggtttctc 644
Query: 902 cagagccatcagagctttcggtctcgaaaggttcaagaagaacgcctcacagatggtgaa 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 cagagccatcagagctttcggtctcgaaaggttcaagaagaacgcctcacagatggtgaa 704
Query: 962 tgggttcaatcatgttctaaacagcatgtaccctcgacaaagtcacagtagtgtgtacac 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 tgggttcaatcatgttctaaacagcatgtaccctcgacaaagtcacagtagtgtgtacac 764
Query: 1022 tctgaaggaggaacgctccaggaatgtactgcccgctgtacacaccagctaacacaagga 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 tctgaaggaggaacgctccaggaatgtactgcccgctgtacacaccagctaacacaagga 824
Query: 1082 cggcatcgctggagatgtgagatagagatagagatggtgttgtaataaataaggttacac 1141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 cggcatcgctggagatgtgagatagagatagagatggtgttgtaataaataaggttacac 884
Query: 1142 aaccttcatgaaagtacacaataataatgtccacataaactagttgtacaggacatatga 1201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 aaccttcatgaaagtacacaataataatgtccacataaactagttgtacaggacatatga 944
Query: 1202 actgtcaaatatttatttatacatgaaatgtgttgtcaattcaactctgttatcataact 1261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 945 actgtcaaatatttatttatacatgaaatgtgttgtcaattcaactctgttatcataact 1004
Query: 1262 agactacacacacgtgttaacaaatgttacctccactgat 1301
||||||||||||||||||||||||||||||||||||||||
Sbjct: 1005 agactacacacacgtgttaacaaatgttacctccactgat 1044
Score = 165 bits (83), Expect = 3e-40
Identities = 83/83 (100%)
Strand = Plus / Plus
Query: 1 agtaaggagcgaaacggggttttctttcgaaaatccttgcaaagtctatcaaaatatacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 agtaaggagcgaaacggggttttctttcgaaaatccttgcaaagtctatcaaaatatacg 145
Query: 61 ctccacggaatttcggcaaaggt 83
|||||||||||||||||||||||
Sbjct: 146 ctccacggaatttcggcaaaggt 168
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 204,650
Number of extensions: 4763
Number of successful extensions: 4763
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4763
Number of HSP's successfully gapped: 2
Length of query: 1573
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1556
Effective length of database: 8,119,229
Effective search space: 12633520324
Effective search space used: 12633520324
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)