BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22709 (UTR included)
(2854 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1209_C1 3850 0.0
>BF14_1209_C1
Length = 2009
Score = 3850 bits (1942), Expect = 0.0
Identities = 1945/1946 (99%)
Strand = Plus / Plus
Query: 479 gaacgaagaataaaggttcaatatggcggccaagggcggtttgaagacgatcgccgggga 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 gaacgaagaataaaggttcaatatggcggccaagggcggtttgaagacgatcgccgggga 123
Query: 539 ggaaaatgaagaaagatttggttttgtgtttgctgtctctggacctgtcgtcacggcaga 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ggaaaatgaagaaagatttggttttgtgtttgctgtctctggacctgtcgtcacggcaga 183
Query: 599 gaagatgtctggatctgctatgtacgagttggtgcgtgtcggatacaacgagctggtcgg 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gaagatgtctggatctgctatgtacgagttggtgcgtgtcggatacaacgagctggtcgg 243
Query: 659 agagatcatccgtctcgagggtgacatggccactatacaagtatacgaggaaacctcagg 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 agagatcatccgtctcgagggtgacatggccactatacaagtatacgaggaaacctcagg 303
Query: 719 agtaacagtaggtgaccccgtcctccgtactggcaaacctctgtccgtggagctcggtcc 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 agtaacagtaggtgaccccgtcctccgtactggcaaacctctgtccgtggagctcggtcc 363
Query: 779 gggtatcctgggatccatcttcgacgggatccaacgtccccttaaagatatcaacgaact 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gggtatcctgggatccatcttcgacgggatccaacgtccccttaaagatatcaacgaact 423
Query: 839 caccaactccatctacattcccaagggagtgaacgtcccatgtcttgctagagaggtcga 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 caccaactccatctacattcccaagggagtgaacgtcccatgtcttgctagagaggtcga 483
Query: 899 ctgggaattcaaccccctcaatgttaaggtcgggtctcacatcaccgggggcgacctgta 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ctgggaattcaaccccctcaatgttaaggtcgggtctcacatcaccgggggcgacctgta 543
Query: 959 cggtatcgtccacgaaaacactctggtaaagcacaagatgttgatcccgccccgcgccaa 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 cggtatcgtccacgaaaacactctggtaaagcacaagatgttgatcccgccccgcgccaa 603
Query: 1019 ggggactgtgacgtacatcgcgcccgccggcaactacaaggtgacggatgtggtgctgga 1078
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 604 ggggactgtgacgtacatcgcgcccgccggcaactacaaggtgacggacgtggtgctgga 663
Query: 1079 gacggagttcgacggagagaagaaccagtacaccatgctgcaggtgtggcccgtgaggca 1138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gacggagttcgacggagagaagaaccagtacaccatgctgcaggtgtggcccgtgaggca 723
Query: 1139 gccgcgccccgtcaccgagaagcttcccgccaaccacccactgctcaccggccagcgcgt 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 gccgcgccccgtcaccgagaagcttcccgccaaccacccactgctcaccggccagcgcgt 783
Query: 1199 gctggactcgctgttcccctgcgtccagggaggcaccaccgccatccccggcgccttcgg 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 gctggactcgctgttcccctgcgtccagggaggcaccaccgccatccccggcgccttcgg 843
Query: 1259 ttgcggcaagacggtcatctcgcaggctctgtccaagtactccaactcggacgtcatcat 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 ttgcggcaagacggtcatctcgcaggctctgtccaagtactccaactcggacgtcatcat 903
Query: 1319 ctacgtcggctgcggggagcgtggtaacgagatgtctgaagtactgcgggacttccccga 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 ctacgtcggctgcggggagcgtggtaacgagatgtctgaagtactgcgggacttccccga 963
Query: 1379 gctgacggtggagatcgagggagtcaccgagtccatcatgaagcgaacggccctggtggc 1438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 gctgacggtggagatcgagggagtcaccgagtccatcatgaagcgaacggccctggtggc 1023
Query: 1439 taacacgtccaacatgcccgtggcggcccgtgaggcttccatctacaccggcatcacgct 1498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 taacacgtccaacatgcccgtggcggcccgtgaggcttccatctacaccggcatcacgct 1083
Query: 1499 gtccgagtacttccgcgacatgggctacaacgtgtccatgatggccgactccacctcccg 1558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1084 gtccgagtacttccgcgacatgggctacaacgtgtccatgatggccgactccacctcccg 1143
Query: 1559 ttgggccgaggctctgcgtgagatctccggtcgtctggccgagatgcccgccgactccgg 1618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1144 ttgggccgaggctctgcgtgagatctccggtcgtctggccgagatgcccgccgactccgg 1203
Query: 1619 ctacccggcctacctgggggcgaggttggcctccttctacgagcgagcgggacgagtcaa 1678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1204 ctacccggcctacctgggggcgaggttggcctccttctacgagcgagcgggacgagtcaa 1263
Query: 1679 gtgcctcggcaaccccgaccgcgagggctccgtgtccatcgtgggggccgtgtctccccc 1738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1264 gtgcctcggcaaccccgaccgcgagggctccgtgtccatcgtgggggccgtgtctccccc 1323
Query: 1739 cggaggtgacttctcggaccccgtgacggccgccacgctgggtatcgtgcaggtgttctg 1798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1324 cggaggtgacttctcggaccccgtgacggccgccacgctgggtatcgtgcaggtgttctg 1383
Query: 1799 gggtctggacaagaagctggcgcagaggaagcacttcccgtccatcaactggctcatctc 1858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1384 gggtctggacaagaagctggcgcagaggaagcacttcccgtccatcaactggctcatctc 1443
Query: 1859 ctacagcaagtacatgcgcgcgctggatgagttctacgagaagaactaccccgagttcgt 1918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1444 ctacagcaagtacatgcgcgcgctggatgagttctacgagaagaactaccccgagttcgt 1503
Query: 1919 cccgctccggactaaggtcaaggagatcctgcaggaggaggaggacctgtccgagatcgt 1978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1504 cccgctccggactaaggtcaaggagatcctgcaggaggaggaggacctgtccgagatcgt 1563
Query: 1979 gcagctggtgggcaaggcgtcgctggccgagaccgacaagatcacgctcgaggtggccaa 2038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1564 gcagctggtgggcaaggcgtcgctggccgagaccgacaagatcacgctcgaggtggccaa 1623
Query: 2039 gctgctgaaggacgacttcctgcaacagaacagctactcggcgtacgaccgcttctgccc 2098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1624 gctgctgaaggacgacttcctgcaacagaacagctactcggcgtacgaccgcttctgccc 1683
Query: 2099 gttctataagacggtgggcatgttgaagaacatcatcgccttctacgacatgtcccgcca 2158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1684 gttctataagacggtgggcatgttgaagaacatcatcgccttctacgacatgtcccgcca 1743
Query: 2159 cgcggtggagtccacggcgcagtccgacaacaaggtcacctggaacgtcatcagggacgc 2218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1744 cgcggtggagtccacggcgcagtccgacaacaaggtcacctggaacgtcatcagggacgc 1803
Query: 2219 catgtcctcggtgctgtacacgctgtcctccatgaagttcaaggacccggtgaaggacgg 2278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1804 catgtcctcggtgctgtacacgctgtcctccatgaagttcaaggacccggtgaaggacgg 1863
Query: 2279 cgaggccaagatcaaggcggacttcgaccagctgctggaggacatgtcggccgccttccg 2338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1864 cgaggccaagatcaaggcggacttcgaccagctgctggaggacatgtcggccgccttccg 1923
Query: 2339 caacctggaggattagatatatgacaccttatgatattcgctgttgttgttagtctcgct 2398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1924 caacctggaggattagatatatgacaccttatgatattcgctgttgttgttagtctcgct 1983
Query: 2399 ccttgaggtcctagttacgatgcggg 2424
||||||||||||||||||||||||||
Sbjct: 1984 ccttgaggtcctagttacgatgcggg 2009
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 240,217
Number of extensions: 4325
Number of successful extensions: 4325
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4323
Number of HSP's successfully gapped: 1
Length of query: 2854
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2837
Effective length of database: 8,119,229
Effective search space: 23034252673
Effective search space used: 23034252673
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)