BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22721 (UTR included)
(1765 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037B1H08 149 2e-35
BF01010B2F09 115 2e-25
BF01056B1D02 101 4e-21
BF01023A2A12 86 2e-16
BF01029B2F12 80 1e-14
BF01052B1H02 68 5e-11
>BF01037B1H08
Length = 758
Score = 149 bits (75), Expect = 2e-35
Identities = 102/111 (91%)
Strand = Plus / Plus
Query: 1648 aagtcgtggtggcctggaggttagaggcccgcctctcacacgtgagggcgcgggttcgga 1707
||||||| ||||||||||||||| |||||||||||||| |||||| |||||||||||| |
Sbjct: 69 aagtcgttgtggcctggaggttaaaggcccgcctctcatacgtgaaggcgcgggttcgaa 128
Query: 1708 acctggcaagtaccaatgtgatttctaccgagtcatatgtactttgtaaga 1758
|||||||||||||||||||||| | | |||||||||||||||||| |||||
Sbjct: 129 acctggcaagtaccaatgtgatcttttccgagtcatatgtactttctaaga 179
>BF01010B2F09
Length = 764
Score = 115 bits (58), Expect = 2e-25
Identities = 97/110 (88%)
Strand = Plus / Minus
Query: 1656 gtggcctggaggttagaggcccgcctctcacacgtgagggcgcgggttcggaacctggca 1715
|||| |||||||||| ||||| ||||||||||||||| | |||||||||| |||||| ||
Sbjct: 544 gtgggctggaggttaaaggccagcctctcacacgtgaagtcgcgggttcgaaacctgaca 485
Query: 1716 agtaccaatgtgatttctaccgagtcatatgtactttgtaagagtgttta 1765
|||||||||||||| | | ||||||||||||||||| ||||||| ||||
Sbjct: 484 agtaccaatgtgatcttcatcgagtcatatgtactttctaagagtattta 435
>BF01056B1D02
Length = 778
Score = 101 bits (51), Expect = 4e-21
Identities = 98/110 (89%), Gaps = 4/110 (3%)
Strand = Plus / Plus
Query: 1648 aagtcgtggtggcctggaggttagaggcccgcctctcacacgtgagggcgcgggttcgga 1707
||||||||||||||||||||||| ||| ||||| | |||||||||||||||||| | |
Sbjct: 457 aagtcgtggtggcctggaggttaaagg-ccgcccat--cacgtgagggcgcgggtt-gaa 512
Query: 1708 acctggcaagtaccaatgtgatttctaccgagtcatatgtactttgtaag 1757
|||||||||||||||||||||| | | |||||||||||||||||| ||||
Sbjct: 513 acctggcaagtaccaatgtgatcttttccgagtcatatgtactttctaag 562
>BF01023A2A12
Length = 723
Score = 85.7 bits (43), Expect = 2e-16
Identities = 102/118 (86%), Gaps = 4/118 (3%)
Strand = Plus / Plus
Query: 1648 aagtcgtggtggcctggaggttagaggcccgcctctcacacgtgagggcgcgggttcgga 1707
|||||||||||||||| |||||| ||| ||||| | |||||||||||||||||| | |
Sbjct: 52 aagtcgtggtggcctgaaggttaaagg-ccgcccat--cacgtgagggcgcgggtt-gaa 107
Query: 1708 acctggcaagtaccaatgtgatttctaccgagtcatatgtactttgtaagagtgttta 1765
|||||||||||||||||||||| | | |||||||| ||||||||| ||| ||| ||||
Sbjct: 108 acctggcaagtaccaatgtgatcttttccgagtcacatgtactttctaacagtattta 165
>BF01029B2F12
Length = 749
Score = 79.8 bits (40), Expect = 1e-14
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Minus
Query: 1690 tgagggcgcgggttcggaacctggcaagtaccaatgtgatttctaccgagtcatatgtac 1749
|||||||||||||||| ||||||||||||||||||||||||| | ||| |||||||||
Sbjct: 671 tgagggcgcgggttcgaaacctggcaagtaccaatgtgatttat-gagagacatatgtac 613
Query: 1750 tttgtaagagtgttta 1765
||| ||||||| ||||
Sbjct: 612 tttctaagagtattta 597
>BF01052B1H02
Length = 790
Score = 67.9 bits (34), Expect = 5e-11
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 1652 cgtggtggcctggaggttagaggcccgcctctcacacgtgagggcgcgggttcggaacct 1711
||||||||||| ||||||| ||||||||||||| || |||||| || |||||| | |||
Sbjct: 561 cgtggtggcctagaggttaaaggcccgcctctcgtacatgagggtgcaggttcgaatcct 502
Query: 1712 ggcaagtaccaatgtgat 1729
|| |||||| ||||||||
Sbjct: 501 gggaagtactaatgtgat 484
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 273,879
Number of extensions: 6801
Number of successful extensions: 6801
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 6798
Number of HSP's successfully gapped: 6
Length of query: 1765
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1748
Effective length of database: 8,119,229
Effective search space: 14192412292
Effective search space used: 14192412292
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)