BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22723 (UTR included)
(1262 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01009A2G12 420 e-117
BF01016B2B03 347 3e-95
BF14_597_C1 176 6e-44
>BF01009A2G12
Length = 783
Score = 420 bits (212), Expect = e-117
Identities = 218/220 (99%)
Strand = Plus / Plus
Query: 410 tgcaggaatatacatacttaacccgtcagtactaagtagaatagaattacgaccgacatc 469
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 72 tgcaggaatatacatacttaacccttcagtactaagtagaatagaattacgacctacatc 131
Query: 470 catagagaaagaagtcttcccatacatggctaaagagggacagttatatgccatggatct 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 catagagaaagaagtcttcccatacatggctaaagagggacagttatatgccatggatct 191
Query: 530 gcagggcttttggatggatgtcggccaaccaaaagattttcttacaggtatgtgtttata 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gcagggcttttggatggatgtcggccaaccaaaagattttcttacaggtatgtgtttata 251
Query: 590 cttaaacagtctccgtcagaagaatccatcaatgctgtac 629
||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 cttaaacagtctccgtcagaagaatccatcaatgctgtac 291
Score = 170 bits (86), Expect = 3e-42
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 657 cttatagatcccactgcaactatcggcaagggctgcagaatcggaccaaatgtcactata 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 cttatagatcccactgcaactatcggcaagggctgcagaatcggaccaaatgtcactata 350
Query: 717 ggaccacatgttgttattgaagatgg 742
||||||||||||||||||||||||||
Sbjct: 351 ggaccacatgttgttattgaagatgg 376
>BF01016B2B03
Length = 752
Score = 347 bits (175), Expect = 3e-95
Identities = 184/187 (98%)
Strand = Plus / Plus
Query: 556 aaccaaaagattttcttacaggtatgtgtttatacttaaacagtctccgtcagaagaatc 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aaccaaaagattttcttacaggtatgtgtttatacttaaacagtctccgtcagaagaatc 211
Query: 616 catcaatgctgtacgaaggttctggggttgttggcaatgtccttatagatcccactgcaa 675
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 212 catcaatgctgtacgaaggttctggcgttgttggcaatgtacttatagatcccactgcaa 271
Query: 676 ctatcggcaagggctgcagaatcggaccaaatgtcactataggaccacatgttgttattg 735
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ctatcggcaaggtctgcagaatcggaccaaatgtcactataggaccacatgttgttattg 331
Query: 736 aagatgg 742
|||||||
Sbjct: 332 aagatgg 338
>BF14_597_C1
Length = 802
Score = 176 bits (89), Expect = 6e-44
Identities = 92/93 (98%)
Strand = Plus / Plus
Query: 410 tgcaggaatatacatacttaacccgtcagtactaagtagaatagaattacgaccgacatc 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 710 tgcaggaatatacatacttaacccgtcagtactaagtagaatagaattacgaccgacgtc 769
Query: 470 catagagaaagaagtcttcccatacatggctaa 502
|||||||||||||||||||||||||||||||||
Sbjct: 770 catagagaaagaagtcttcccatacatggctaa 802
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 198,438
Number of extensions: 4105
Number of successful extensions: 4105
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4105
Number of HSP's successfully gapped: 4
Length of query: 1262
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1245
Effective length of database: 8,119,229
Effective search space: 10108440105
Effective search space used: 10108440105
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)