BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22724 (UTR included)
(2254 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01038B2C07 1259 0.0
>BF01038B2C07
Length = 758
Score = 1259 bits (635), Expect = 0.0
Identities = 693/711 (97%), Gaps = 1/711 (0%)
Strand = Plus / Plus
Query: 1545 tggacagaatatgtattaagacacagagaaaagaatcattttcgtactctagctagtaac 1604
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 tggacagaatatgtattaagacacagagaaaacaatcattttcgtactctagctagtaac 60
Query: 1605 ttgtcatacatggattacttcgatgtaaagttttggatgactatttttgcaatcattggt 1664
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 61 ttgtcatacatggattacttcgatgtaaagttttggatgactatttttgcaatcatgggt 120
Query: 1665 atctttttaactttatttgtggtaacgattgcatatgttattaagttactgaataaaatg 1724
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atctttttaacgttatttgtggtaacgattgcatatgttattaagttactgaataaaatg 180
Query: 1725 tggatttataataaggttaaaacacactaatcactcacacgatattgttttcagttattt 1784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggatttataataaggttaaaacacactaatcactcacacgatattgttttcagttattt 240
Query: 1785 atatcttaaaatatgaagaacgtaacgagttaaattaaatgtaataggatttt-ttttaa 1843
||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||
Sbjct: 241 atatcttaaaatatgaagaacgtgacgagttaaattaaatataataggatttttttttaa 300
Query: 1844 ttttaagtttcgttaaacctttttctgttaaattttctttgaatataaaggttatcaatt 1903
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 301 ttttaagtttcgttaaacctttttctgataaattttctttgaatataaaggttatcaatt 360
Query: 1904 atttgttttacaatagctttaatttcccagatcaatacataatggtaattagtgagaagt 1963
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 361 atttgttttacaatagctttaatttcccagatcaatacataatgctaattagtgagaagt 420
Query: 1964 gaaaggtgactcttggtatgcagttaattggttcaatataaattaatagtcataatagtg 2023
|||||||||||||| || |||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 421 gaaaggtgactctttgtgtgcagttaattggttcaatataaattaaaagtaataatagtg 480
Query: 2024 cttagtaacacttatgttgtatttaattctaataatataaggtgtgtttctaattttatt 2083
|||||||||||| ||||||||||||| ||||||||| |||||||| ||||||||||||||
Sbjct: 481 cttagtaacactcatgttgtatttaagtctaataatttaaggtgtttttctaattttatt 540
Query: 2084 aatgaaactgactgtatcttatgaagttatgacatatttgtattaagactcaaacacgct 2143
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aatgaaactgattgtatcttatgaagttatgacatatttgtattaagactcaaacacgct 600
Query: 2144 ttgatattaagcgtaatttcacaatttatgatgcagaacctttgtgtcttatgttattac 2203
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 601 ttgatattaagcgtaatttcacaatttatgatgcagaacctttgtgtcttatattattac 660
Query: 2204 aataatgtttgaatattcgatgtttttaatcactttgtgttgccatacatt 2254
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aataatgtttgaatattcgatgtttttaatcactttgtgttgccatacatt 711
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 311,883
Number of extensions: 6030
Number of successful extensions: 6030
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6029
Number of HSP's successfully gapped: 1
Length of query: 2254
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2237
Effective length of database: 8,119,229
Effective search space: 18162715273
Effective search space used: 18162715273
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)