BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN22726 (UTR included)
(3304 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01038A2B02 1409 0.0
BF14_2493_C1 480 e-135
>BF01038A2B02
Length = 773
Score = 1409 bits (711), Expect = 0.0
Identities = 723/727 (99%)
Strand = Plus / Plus
Query: 924 tacggcaagagttggcaggcgagcccggaagtactgacgaaactggaagtgccacctcag 983
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 47 tacggcaagagttggcaggcgagcccggaagtactgacgaaactggaagtaccacctcag 106
Query: 984 gagcagtgcggcgacatcccaccgccaccaccctgtgtgcctcctccaccggaaagcaat 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 gagcagtgcggcgacatcccaccgccaccaccctgtgtgcctcctccaccggaaagcaat 166
Query: 1044 ccgtgttacaacctaaacaacgtagagaagtttggagcttgccacgcgcttgtagagcct 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 ccgtgttacaacctaaacaacgtagagaagtttggagcttgccacgcgcttgtagagcct 226
Query: 1104 cagtcctacatagagcagtgcgagtcagagctctgcgagttgaactcgactgacgcttgt 1163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 cagtcctacatagagcagtgcgagtcagagctctgcgagttgaactcgactgacgcttgt 286
Query: 1164 ccggtgctggagcggtacgcggccgagtgtcgcaaacagggtgtttgcctcgactggaga 1223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ccggtgctggagcggtacgcggccgagtgtcgcaaacagggtgtttgcctcgactggaga 346
Query: 1224 agcgatctatgtccatacccatgcgacgagccgctcgtatacagaaagtgcgtggactgt 1283
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 347 agcgatctatgtccatacccatgcgacgagccactcgtatacagaaagtgcgtggactgt 406
Query: 1284 gagagaacttgtgaaaattacgaagaactgaaggacaatccaaaactctgcgataaacaa 1343
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 407 gagagaacttgtgaaaattacgaagaactgaaggacaacccaaaactctgcgataaacaa 466
Query: 1344 cccgtcgaaggatgcttctgtccggaaggaaaggtgagagtgaacaacacgtgtatcgaa 1403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 cccgtcgaaggatgcttctgtccggaaggaaaggtgagagtgaacaacacgtgtatcgaa 526
Query: 1404 ccgagcaagtgcttcccgtgtgatacaaagaaggaacactacgccggggacgagtggcaa 1463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ccgagcaagtgcttcccgtgtgatacaaagaaggaacactacgccggggacgagtggcaa 586
Query: 1464 gaagacgcgtgcactcattgcacgtgcagtaagtcgggcgagagcgcacacgtgtcgtgt 1523
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 gaagacgcgtgcactcactgcacgtgcagtaagtcgggcgagagcgcacacgtgtcgtgt 646
Query: 1524 acaacgcgtacgtgcgcgccgcccgtgtgcgctgacggagaggaacgtgtgccggccgcc 1583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 acaacgcgtacgtgcgcgccgcccgtgtgcgctgacggagaggaacgtgtgccggccgcc 706
Query: 1584 acaccaccaggagcctgttgcaaggagtacctgtgcgttcctaaaccgccggacgtggtc 1643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 acaccaccaggagcctgttgcaaggagtacctgtgcgttcctaaaccgccggacgtggtc 766
Query: 1644 tgcgacg 1650
|||||||
Sbjct: 767 tgcgacg 773
>BF14_2493_C1
Length = 812
Score = 480 bits (242), Expect = e-135
Identities = 245/246 (99%)
Strand = Plus / Plus
Query: 1705 ccgatggatgttcagaattcgtctgcgaatgcaagccggaaagcgaatgtgaacctcttc 1764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ccgatggatgttcagaattcgtctgcgaatgcaagccggaaagcgaatgtgaacctcttc 62
Query: 1765 ccgatgagagtgaagtggagatgttggagccggggatggagcgcgtcgtggaccgctcgg 1824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 ccgatgagagtgaagtggagatgttggagccggggatggagcgcgtcgtggaccgctcgg 122
Query: 1825 gatgttgtccgcgagcctcgctccactgccgccccgaggcctgccccgcggcccccgact 1884
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 123 gatgttgtccgcgagcctcgctccactgccgccccgaagcctgccccgcggcccccgact 182
Query: 1885 gtcccgcactacataacctacgtactaccaatgtcacgggccagtgttgtcccgaacaca 1944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gtcccgcactacataacctacgtactaccaatgtcacgggccagtgttgtcccgaacaca 242
Query: 1945 agtgcg 1950
||||||
Sbjct: 243 agtgcg 248
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 469,053
Number of extensions: 12062
Number of successful extensions: 12062
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 12062
Number of HSP's successfully gapped: 2
Length of query: 3304
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3286
Effective length of database: 8,109,745
Effective search space: 26648622070
Effective search space used: 26648622070
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)