| New model in OGS2.0 | DPOGS204574 |
|---|---|
| Genomic Position | scaffold4897:+ 2433-8311 |
| See gene structure | |
| CDS Length | 1875 |
| Paired RNAseq reads | 340 |
| Single RNAseq reads | 830 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001979 (4e-58) |
| Best Drosophila hit | CG6867 (2e-77) |
| Best Human hit | neurotrimin isoform 2 (9e-13) |
| Best NR hit (blastp) | colmedin [Culex quinquefasciatus] (1e-123) |
| Best NR hit (blastx) | AGAP005849-PA [Anopheles gambiae str. PEST] (4e-112) |
| GeneOntology terms | GO:0005575 cellular_component GO:0008150 biological_process GO:0003674 molecular_function |
| InterPro families | IPR007110 Immunoglobulin-like IPR013783 Immunoglobulin-like fold IPR003599 Immunoglobulin subtype IPR003598 Immunoglobulin subtype 2 IPR008160 Collagen triple helix repeat IPR013098 Immunoglobulin I-set |
| Orthology group | MCL12323 |
Nucleotide sequence:
ATGACTTCGGACTTAATCAAGGATAATAAGAATAGAGGAGAAGTTGCTGCTACAGATGTG
CCGTGCTGCAAGAAAATTACTGTGTTTGCCTGTGTCTCTGGCGTTTTTTCATTAATTTTG
CATGCATATAGCTATGCAGAACTCTCGGCTATTAAAAGTCATGAAGAGTTACATTCTAGA
CACATAAATAAACTCATAGAAAATAGGATTCAAGAAAGATTTATAGAGTTAATGAGTACA
ACTAGCCCCCATAGATTAAAAAGAGATGCGATGCTTAAACAATCCCCCATCGAGGAGGAT
AATACGGTTGCTCCACACGTGGAATTTTTCAACCCTAAAATGAGACCAGAACTAGAAGAG
AAAGACTCCATAGAAATGAAAAGAACCGGTGCCAAGGGACCTGCCCCGGGAGACGACACT
TGGGTTTGGCTGACGAGCTACTCCAGGGTCCCATACAAAGTAGTTCAAGGGTTTTGCAAG
GCTACACAAGATTACTGTCCTCCTGGCGTCCAAGGACCAAAAGGTCCCATGGGTCACCCA
GGTCCAAAAGGAGACAGGGGGTCACCAGGGGAGGCTGGCATACCTGGTAGCCCAGGTTCA
GTAGGACCTTTCGGACCCCCTGGACCAAAAGGCGAACGTGGATTCCCGGGCAACCCTGGC
TTAGATGGTAGAGATGGAGTGCCGGGAGAACCAGGACTTGACGGCTTGCCGGGGCGGAAT
GGGGCCGACGGAGCCCCGGGTAGGTACGGACAAGACGGGATACCAGGCAGGGATGGAATC
CCAGGAAAAAATGGAAAGGATGGAAAAGATGGAAAAGTCGGAGCTCAGGGCCCACCTGGT
ATTCGAGGCCCTAAAGGCGAACGAGGTCCAATCGGCCCCAAAGGCCCGAAGGGAAATGAC
GGACTTAACGGAATACCCGGCAAGCCAGGACTATCCATCTATAACTACACCAAAGAAAAC
CAGATGTTCATTCCCCCTTCCTTTGCATTGGATAATCCGAGACTTATAGTAAGAGAGGGG
GATACTATGAGATTGGACTGCAATCCCAAAGGCTTCCCTGAACCCATTATTGAATGGAGG
AGAGCTGACGGCACACCCATTATTCAGGGTTCATGGCGTGACGCCTCCGTCAGTGGTCAC
GTGCTTAACATACCAAACGTATCTCGTTGGCACACCGGCAAGTATGTATGTCTCGCTAAC
AACGGCATGCAGCCTCCCGCTAACCAGACCACGGACGTTGAAGTCAATTTCAGCCCATAC
ATAAGGGTGCCAAACAACATAGTCTACGTATTCAACAAAACTGCCCAAATCGAGTGCGAG
ATTCAAGCCTGGCCGGAGCCAGTGCTGGCTTGGGAGTACGACGATGGAACAACAGTCGAG
GGATCACACTACAAGATTGAGGTGGCGCCAACACCGGATCCCTGGAGGTGGATCATGAAG
CTGGAGATACCTCACATCAATGAGCACGACATGCGCCAGTACATCTGCGTGGCCAAAAAT
GAACTCAATAACACAACCGTCAGAGGCTATATTAGACTGTCCCATCCTGGTCCGAAACAA
CAATCTCAGATACAACAACAACCACGCGAGTTCGGCTCCCCTCCGCCCACGTTGACCTCG
TACGAAGAACTGTGCTCCGCCCAACGCTGCCCATCCTGCCCACGATGTGATCGAGCGCTC
ATGATCACGCCCATGAACGCCAGCTTAGGCAACAAGCCTCACCGGAATACCAATTGTCAG
CTGTACGCGATCGGCAAACCAGTGTACCACAAGTACAAGGAGGAGTTGTTTGGTGCCTGG
CTAAGAGATTCGAATTCCTCTGAAGCTCAGGTAAACAAGGAAAAAGAGACCAATTATACT
ACCCCTAGCTCGTGA
Protein sequence:
MTSDLIKDNKNRGEVAATDVPCCKKITVFACVSGVFSLILHAYSYAELSAIKSHEELHSR
HINKLIENRIQERFIELMSTTSPHRLKRDAMLKQSPIEEDNTVAPHVEFFNPKMRPELEE
KDSIEMKRTGAKGPAPGDDTWVWLTSYSRVPYKVVQGFCKATQDYCPPGVQGPKGPMGHP
GPKGDRGSPGEAGIPGSPGSVGPFGPPGPKGERGFPGNPGLDGRDGVPGEPGLDGLPGRN
GADGAPGRYGQDGIPGRDGIPGKNGKDGKDGKVGAQGPPGIRGPKGERGPIGPKGPKGND
GLNGIPGKPGLSIYNYTKENQMFIPPSFALDNPRLIVREGDTMRLDCNPKGFPEPIIEWR
RADGTPIIQGSWRDASVSGHVLNIPNVSRWHTGKYVCLANNGMQPPANQTTDVEVNFSPY
IRVPNNIVYVFNKTAQIECEIQAWPEPVLAWEYDDGTTVEGSHYKIEVAPTPDPWRWIMK
LEIPHINEHDMRQYICVAKNELNNTTVRGYIRLSHPGPKQQSQIQQQPREFGSPPPTLTS
YEELCSAQRCPSCPRCDRALMITPMNASLGNKPHRNTNCQLYAIGKPVYHKYKEELFGAW
LRDSNSSEAQVNKEKETNYTTPSS