| New model in OGS2.0 | DPOGS213019 |
|---|---|
| Genomic Position | scaffold46:+ 10914-13838 |
| See gene structure | |
| CDS Length | 2925 |
| Paired RNAseq reads | 409 |
| Single RNAseq reads | 1139 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006939 (9e-86) |
| Best Drosophila hit | DNA-polymerase-delta (0.0) |
| Best Human hit | DNA polymerase delta catalytic subunit (0.0) |
| Best NR hit (blastp) | DNA polymerase delta catalytic subunit [Culex quinquefasciatus] (0.0) |
| Best NR hit (blastx) | DNA polymerase delta catalytic subunit [Culex quinquefasciatus] (0.0) |
| GeneOntology terms | GO:0043625 delta DNA polymerase complex GO:0003887 DNA-directed DNA polymerase activity GO:0008296 3'-5'-exodeoxyribonuclease activity GO:0006273 lagging strand elongation GO:0006272 leading strand elongation GO:0008310 single-stranded DNA specific 3'-5' exodeoxyribonuclease activity GO:0006260 DNA replication GO:0000166 nucleotide binding GO:0003677 DNA binding GO:0005875 microtubule associated complex GO:0006974 response to DNA damage stimulus |
| InterPro families | IPR017964 DNA-directed DNA polymerase, family B, conserved site IPR004578 DNA-directed DNA polymerase, family B, pol2 IPR012337 Ribonuclease H-like IPR006172 DNA-directed DNA polymerase, family B IPR023211 DNA polymerase, palm domain IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain |
| Orthology group | MCL13195 |
Nucleotide sequence:
ATGGAAGGTAATTCAGTTTGCTGCCATGTACATGGTTTTACACCATACTTTTATGTCACA
GTACCTTTGAATTTTAAGGAATCCAATTGTCATGAATTAAAATCAAACTTAAACAAAGCT
ATTCTCGAAGATCTTCGTTCTAATAAAGATAATATTAGAGAAACAGTGTTAGAAGTGAAG
TTAGTAAAAGCTAAATCTATCATGTATTACAAAAATGATGACGATACAACATTTGCTCGA
GTCTCTGTTGCTCTGCCAAAACTAATTGCCGCTGCAAAGAGATTAATTGAAAGACAGCCA
ACATCATTTGGCCTTATGAATCCTTCATTTTATGAAACAAACATTGATTTTGATATTCGA
TTTATGGTCGACACATCTGTTGTTGGGTGCAGCTGGATAGAACTCCCTCCAGGTAAATGG
TCTTTAAGAACAAAAGATAATTCAGTAAAGCCAGAATCGAGGTGCCAAATTGAAGTTGAT
GTTGCATGGAATCAGTTCATTTCTCATCAACCAGAAGGAGAATGGCTAAAACTTGCACCT
TTCCGAATTTTAAGTTTTGATATTGAATGTGCTGGTAGGAAAGGTGTATTTCCAGAACCA
AAACATGATCCTGTTATTCAAATTGCTTCAATGGTCATAAGACAAGGAGAAAGCGAACCA
TATCTTAGAAATGTGTTTACTCTAAATACATGTGCACCTATTGTAGGATCTCAAGTATTC
AGTTTTCAATCTGAAGCAGAGATGTTATCAAAATGGTCAGACTTCTTCCGTGAGCTTGAT
GCAGATATCATTACAGGATATAATATATGTAACTTTGACTGGCCCTATCTAATTAACCGG
GCCAAACATCTAAAAGTTGATTGTTTTGACTTTTTAGGTCGTATTAAAAATATCAGATCT
GTTATCAAAGACACTATATTACAGTCAAAACAAATGGGTCGAAGAGAAAACAAAAGCATA
AATTTTGAGGGCAGGGTTCCCTTTGATTTACTTCTTGTTCTTGTAAGAGATTATAAATTG
AGATCATATACTTTAAATGCAGTTAGTTATCATTTTCTTCAAGAACAAAAAGAAGATGTT
CACCATAGTATTATTTCAGACCTACAAAATGAAAATGAGCAGACAAGAAGGCGTCTAGCT
ATGTACTGTTTAAAGGATGCTTATTTACCTCTTAAACTATTAAATAAACTTATGTGTATC
ATAAATTATATAGAAATGGCCAGGGTCACTGGTGTTCCTTTATTATGTTTATTAACTCGT
GGTCAGCAAATAAAAGTTGTAAGCCAGTTATTGCGCAAATCGAAGGGGGCAGGGTATTTA
ATGCCAGCTTACCATAGTCAAGGTTCCGAAGATCAATTTGAGGGGGCTACAGTTATTGAA
CCCAAAAAGGGATATTATGCAGATCCAATCTCAACATTGGATTTTGCATCTCTATACCCA
AGTATAATGATGGCCCATAACTTATGCTATACTACATTAGTGCCACCCAACATTCAGAAA
GAAATTAATCTGAACTCTGATGATGTAACTGTTACACCTTCCAATAATATGTTCGTTAAA
GCACACAAACGGAAAGGATTACTACCTGAAATTTTAGAATCCCTACTTGCTGCTCGAAAA
AAAGCTAAGGCTGATTTAAAAGAAGAGAAGGACCCATTAAAAAGATCTGTGCTCGATGGC
AGACAATTAGCTTTAAAAATAAGTGCAAACTCTGTTTATGGTTTCACTGGTGCACAAGTT
GGCAAATTACCTTGCTTAGAAATATCAGGTAGTGTAACAGCATATGGAAGGACTATGATA
GAATTTACTAGAGCAGAGGTTGAAAAAAAATATACCAAGTCCAACGGATACAAGGAAGAC
GCTGTTGTCATATATGGCGACACTGACTCAGTCATGGTAAAATTTGGTGTGAAAACTTTA
GAAGAAAGTATGGAGCTTGGTAGAGAAGCAGCTGAATTTGTAACTTCAAAATTTGTTAAG
CCCATTAAATTGGAGTTTGAAAAAGTATATTACCCTTACCTTCTTATTAATAAAAAGAGG
TATGCAGGACTCTACTTTACTAAACCAGAAAAATATGATAAGATGGATTGTAAAGGCATA
GAAACGGTCAGAAGAGATAACTGCCCCCTAATTTCGAATATGATGAGTACTTGTCTTCAG
AAACTATTAATAGATAGAGATCCTGATGGTGCTATTAATTATGCCAAACAAATGATATCC
GATCTTTTGTGTAACCGCATTGATATTTCCCAACTTGTTATAACTAAGGAACTCACTAAA
AATGATTATGCTGCTAAGCAGGCTCATGTTGAATTGGCTAATAAAATGAAAAAACGAGAT
GCTGGTACTGCACCTAAGCTTGGTGACCGAGTTCCATATGTTTTATGTAGTGCTGCAAAA
AATACTCCTGCATATATGAAGGCAGAAGATCCCATATATGTTTTAGAAAATAGTGTGCCC
ATTGATTTTAATTATTATTTAGAAAATCAATTATCCAAACCCTTACTCAGAATTTTTGAA
CCAATACTAGGTGAAAAAGCTGAATCTTTACTACTTAAAGGTGAACATACAAGGACAAAG
GCAATGGTCACATCTAAAGTTGGTGCACTGGCAGCATTTACTAAAAAAAAAGAAAAATGT
ATTGGCTGTAAAACCGTTATGCCCAATGATACTAAAAAAGCCTTATGTGATCACTGTTTA
AAAAATGAAGGACAGCTATATATAACTGAAGTATTTAAATTAAGGCAATTGCAAGAAAGA
TTCTCACGGCTTTGGACAGAATGTCAACGATGTCAAGGGAGTCTTCATGAAGAAGTATTG
TGCACAAACAGAGACTGCACTATATTTTATATGAGAAAAAAAATGGGAATGGAACTTGAC
ACTCAAGAAAAAACAGTCCTCAGGTTTGGGGAACCTATTTGGTAA
Protein sequence:
MEGNSVCCHVHGFTPYFYVTVPLNFKESNCHELKSNLNKAILEDLRSNKDNIRETVLEVK
LVKAKSIMYYKNDDDTTFARVSVALPKLIAAAKRLIERQPTSFGLMNPSFYETNIDFDIR
FMVDTSVVGCSWIELPPGKWSLRTKDNSVKPESRCQIEVDVAWNQFISHQPEGEWLKLAP
FRILSFDIECAGRKGVFPEPKHDPVIQIASMVIRQGESEPYLRNVFTLNTCAPIVGSQVF
SFQSEAEMLSKWSDFFRELDADIITGYNICNFDWPYLINRAKHLKVDCFDFLGRIKNIRS
VIKDTILQSKQMGRRENKSINFEGRVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDV
HHSIISDLQNENEQTRRRLAMYCLKDAYLPLKLLNKLMCIINYIEMARVTGVPLLCLLTR
GQQIKVVSQLLRKSKGAGYLMPAYHSQGSEDQFEGATVIEPKKGYYADPISTLDFASLYP
SIMMAHNLCYTTLVPPNIQKEINLNSDDVTVTPSNNMFVKAHKRKGLLPEILESLLAARK
KAKADLKEEKDPLKRSVLDGRQLALKISANSVYGFTGAQVGKLPCLEISGSVTAYGRTMI
EFTRAEVEKKYTKSNGYKEDAVVIYGDTDSVMVKFGVKTLEESMELGREAAEFVTSKFVK
PIKLEFEKVYYPYLLINKKRYAGLYFTKPEKYDKMDCKGIETVRRDNCPLISNMMSTCLQ
KLLIDRDPDGAINYAKQMISDLLCNRIDISQLVITKELTKNDYAAKQAHVELANKMKKRD
AGTAPKLGDRVPYVLCSAAKNTPAYMKAEDPIYVLENSVPIDFNYYLENQLSKPLLRIFE
PILGEKAESLLLKGEHTRTKAMVTSKVGALAAFTKKKEKCIGCKTVMPNDTKKALCDHCL
KNEGQLYITEVFKLRQLQERFSRLWTECQRCQGSLHEEVLCTNRDCTIFYMRKKMGMELD
TQEKTVLRFGEPIW