New model in OGS2.0 | DPOGS213022  |
---|---|
Genomic Position | scaffold46:+ 30162-31335 |
See gene structure | |
CDS Length | 1011 |
Paired RNAseq reads   | 13 |
Single RNAseq reads   | 48 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006942 (5e-92) |
Best Drosophila hit   | Sp1, isoform D (2e-45) |
Best Human hit | transcription factor Sp3 isoform 1 (8e-48) |
Best NR hit (blastp)   | transcription factor btd [Culex quinquefasciatus] (1e-55) |
Best NR hit (blastx)   | PREDICTED: similar to trans-acting transcription factor 5 [Apis mellifera] (2e-53) |
GeneOntology terms    | GO:0003677 DNA binding GO:0048596 embryonic camera-type eye morphogenesis GO:0030324 lung development GO:0001779 natural killer cell differentiation GO:0046872 metal ion binding GO:0030219 megakaryocyte differentiation GO:0003690 double-stranded DNA binding GO:0003682 chromatin binding GO:0001892 embryonic placenta development GO:0001889 liver development GO:0008270 zinc ion binding GO:0030217 T cell differentiation GO:0005622 intracellular GO:0001829 trophectodermal cell differentiation GO:0030183 B cell differentiation GO:0030851 granulocyte differentiation GO:0005634 nucleus GO:0001503 ossification GO:0048706 embryonic skeletal system development GO:0060216 definitive hemopoiesis GO:0005515 protein binding GO:0006355 regulation of transcription, DNA-dependent GO:0030224 monocyte differentiation GO:0043353 enucleate erythrocyte differentiation GO:0060136 embryonic process involved in female pregnancy |
InterPro families    | IPR007087 Zinc finger, C2H2-type IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR015880 Zinc finger, C2H2-like |
Orthology group | MCL40115 |
Nucleotide sequence:
ATGCAATACGTGGATCCGCCCGCGCAACAGGTGATGAATGTGATGAGTGGTTACGGTTGT
GGTTACGGGCGTAGTGATGCTCTGTCGCCAGCCTCGGATTTATCATCGTGCAGCAGTGCC
TCGTCCGGTGCTTGGTGTGGCACCAGCTGGAGAGAGCTGCCACCATACCCTCAGTATCCC
GCATATTGGCCACCAACTACTTCAACCACCGAAGACGCAAGAGAAATTCAACGGCGTTGC
GCAAAATGCCGTTGCCCTAACTGCCTTACAGAAGCAGCTGGATTTGGGCCAAACTACGGC
AAGGATGGCGCGAAAAGGGAGCATGTGTGTCACGTTCCCGGATGCGGGAAAGTTTATGGA
AAAACATCTCATCTTAAAGCCCATCTCCGCTGGCACACAGGGGAGAGACCTTTCGTGTGC
AACTGGCTATTTTGTGGAAAGAGATTTACCCGTTCCGATGAACTACAGCGTCATCTTCGC
ACTCATACTGGTGAGAAAAGATTTGCTTGCCAGTTGTGTACGAAACGTTTCATGCGCTCC
GATCACCTCGCGAAACATGTAAAGACACACGCGAATGTGTCGAGGAAGGCGAAAAAGGCT
AAAGACGATGAAAAGGAATCGATTGTTAAGTCTAATGATGAGAAAGCAGAACAAAGACAA
ATAACTGAAATAACACCACCTCCAGCTGTAGCTCCAATCGGTAGTTCGAACTATGGAACA
GTGCCCACATTAAACGAGGGGCCGAAGCAGATTTTAAATTACGCAACAGTAGCCCCTCAC
GTAATGTCAGGTGCTCCAGCGAGTTATAATAGTAGTGGTGTGTTTGCTAACGGAAATGTC
CCTTACAGCAGTGGTTGGTACCCGGAGGTTCGTCAGGACTCATTGTACTCCAGAGACCCA
CGTTTCTACCAACAATATCCCTCACACCTAACATACCAGTGCGCCTCCAAGGATAACTAT
GTTTTCCAAGGACATTATAATTTCCAACCACCCGTGGCCATAGGACAGTGA
Protein sequence:
MQYVDPPAQQVMNVMSGYGCGYGRSDALSPASDLSSCSSASSGAWCGTSWRELPPYPQYP
AYWPPTTSTTEDAREIQRRCAKCRCPNCLTEAAGFGPNYGKDGAKREHVCHVPGCGKVYG
KTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACQLCTKRFMRS
DHLAKHVKTHANVSRKAKKAKDDEKESIVKSNDEKAEQRQITEITPPPAVAPIGSSNYGT
VPTLNEGPKQILNYATVAPHVMSGAPASYNSSGVFANGNVPYSSGWYPEVRQDSLYSRDP
RFYQQYPSHLTYQCASKDNYVFQGHYNFQPPVAIGQ