| New model in OGS2.0 | DPOGS211221 |
|---|---|
| Genomic Position | scaffold93:- 160827-162279 |
| See gene structure | |
| CDS Length | 1380 |
| Paired RNAseq reads | 274 |
| Single RNAseq reads | 631 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003199 (0.0) |
| Best Drosophila hit | CG10561 (2e-40) |
| Best Human hit | spermine oxidase isoform 1 (2e-54) |
| Best NR hit (blastp) | protein anon-37Cs, putative [Pediculus humanus corporis] (3e-180) |
| Best NR hit (blastx) | protein anon-37Cs, putative [Pediculus humanus corporis] (0.0) |
| GeneOntology terms | GO:0005737 cytoplasm GO:0005634 nucleus GO:0055114 oxidation reduction GO:0046208 spermine catabolic process GO:0046592 polyamine oxidase activity GO:0016491 oxidoreductase activity |
| InterPro families | IPR002937 Amine oxidase |
| Orthology group | MCL12622 |
Nucleotide sequence:
ATGGCAGGTTTATCAGCAGCTCATCGACTAACTCAATGTGGAATTAATAATTTTTTAGTT
TTGGAAGCCAAGGAAAGACCTGGTGGGCGTATTCACTCATGTTGGCTTGGAGACTCAGTG
ATCGAAATGGGCGCTGAATGGATTCGGGGAGCATGTTTACCTAATCCTGTATATACGTTA
GCATCAACAGACAGACTTTTGCAGGACCCACTTGCTCGTCTGGACGCAACTAAAGGGCTA
TTCTGTACCAGCGAAGGCCGTGCTATAGATTTACCAGTGACAATCACAGCCTATCACACA
TTTAGGCAAATAGAACAACAAGCTGCTAATCTATTTAGATTAGGATGTGAAAGAAGGCAT
GGTACACTCCTTAATTTTATAGCATTACGTATCCAACAGGAGCTACATAATTTTCCCGAA
GACCAACGATACGACGCAGCCAGGGTAATGTTTGGCTTAACTAACATATTAAGAAATAGA
TGCGGTGACGATTTATCACTTATAAGTGCTGATCAATATGGAAGCTACATTGAACTCCCT
GGAGGTGTTGTCCGTGTTCCATTAGGCTTTATAGGAGTCATAGCACCATTGCTTCGAGGA
TTACCAGATAATTGTATTCGTTATAATAAAGCTGTTAACGTCATTCGCTGGGGAAAAGGC
CAGACAGGTAAAGGTAGAGTCTTAGTAAAATGTTGTGATGGAGAAGAAATAAACGCTGAT
TATGTCATTGTTACAATGTCTCTCGGTTGTCTAAAATGCCAAGCTGATAAACTGTTTGCT
CCACCTCTACCAATGTGTAAACTGGAGGCTATATGTAATTTAGGCTATGGCCTAAGTGAC
AAAATATTCCTAGAATATGCGGAACCGTATTGGGCCTGTAATGAGGGAAATCTAAAATTA
GCTTGGTCTGCTGAGGAACTTCAGTGCAGGTGCGATTGGACCAGAGGAGTTTGTGCCATA
GATGAACTGCCAGGAAGTAAACATGTTTTATGCTCCTTGATATCTGGACAGGAAGCGGCT
GTCATGGAGTCGATGTCAGAGAGTGATGTTGCTGAAGGATTGACATGTCTTTTGCGTAGA
TTTACTGGAAACCCTTGTCTTCCATATCCGCAAATGATACTAAGGTCGCGTTGGGCACTC
GATCCCCATTTTTGTGGAGCATACAGTTATATGGGCTGTTGTTCAAACGTTAGTCTCCAA
TGCGAGCTTGGAACACCTGTGCCTGGGCCCTGTGACCCACAGCCTCCTATAATTTGTTTT
GCTGGTGAGGCCACTGTGCCTGGCCATTTCGCTACAGTACACGGAGCCAGACTAAGCGGT
GTAAGAGAAGCAGAACGTATTATACAGCTTACTAAAAAATTCGACGGCCCTCCGCGTTAA
Protein sequence:
MAGLSAAHRLTQCGINNFLVLEAKERPGGRIHSCWLGDSVIEMGAEWIRGACLPNPVYTL
ASTDRLLQDPLARLDATKGLFCTSEGRAIDLPVTITAYHTFRQIEQQAANLFRLGCERRH
GTLLNFIALRIQQELHNFPEDQRYDAARVMFGLTNILRNRCGDDLSLISADQYGSYIELP
GGVVRVPLGFIGVIAPLLRGLPDNCIRYNKAVNVIRWGKGQTGKGRVLVKCCDGEEINAD
YVIVTMSLGCLKCQADKLFAPPLPMCKLEAICNLGYGLSDKIFLEYAEPYWACNEGNLKL
AWSAEELQCRCDWTRGVCAIDELPGSKHVLCSLISGQEAAVMESMSESDVAEGLTCLLRR
FTGNPCLPYPQMILRSRWALDPHFCGAYSYMGCCSNVSLQCELGTPVPGPCDPQPPIICF
AGEATVPGHFATVHGARLSGVREAERIIQLTKKFDGPPR