| New model in OGS2.0 | DPOGS211224 |
|---|---|
| Genomic Position | scaffold93:- 121442-123496 |
| See gene structure | |
| CDS Length | 2055 |
| Paired RNAseq reads | 1537 |
| Single RNAseq reads | 4672 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003202 (4e-111) |
| Best Drosophila hit | SNF4/AMP-activated protein kinase gamma subunit, isoform B (1e-85) |
| Best Human hit | 5'-AMP-activated protein kinase subunit gamma-2 isoform a (5e-61) |
| Best NR hit (blastp) | PREDICTED: similar to AMP-activated protein kinase, gamma regulatory subunit [Tribolium castaneum] (1e-100) |
| Best NR hit (blastx) | PREDICTED: similar to AMP-activated protein kinase, gamma regulatory subunit [Tribolium castaneum] (5e-95) |
| GeneOntology terms | GO:0004674 protein serine/threonine kinase activity GO:0006468 protein amino acid phosphorylation GO:0004679 AMP-activated protein kinase activity GO:0042632 cholesterol homeostasis GO:0045787 positive regulation of cell cycle |
| InterPro families | IPR000644 Cystathionine beta-synthase, core IPR013785 Aldolase-type TIM barrel |
| Orthology group | MCL39729 |
Nucleotide sequence:
ATGGATCCTATATTAGAAAACGAATCCGCGACCACAGAATCATCAAGCAAACATGGAAAA
AATAAACACAGAAACAAGAAGAAAAAGAGTAATCAGGAAATGCAAAATGAAAATCAAACT
GTTGTTGGAGAGAAGAAAAAATTTGTAGTTACAACTCTATCTGGTAGCAATGAGCAAAAT
ATCTCCGAGGGTTATGCTCAAAGCAACGTTCATACAATCCACTTTGGAACACGTGGCGCT
GAATCACAAAGACCACACGTTAGATCAATTTTCAAAGATAGACCACCTGAAACATCTAGA
CCGTCAAGTGCAGAGCGAGATCAAATAAGTAAAGGTAAGGAATATGAGACTTTTCACGGA
ACGTCGTCCAGTCCAAGGAGCTCCATATTCGACATATTTCGAATAAGGAGAAAGAGTGAT
TCCAAAAAACATCAATCGCTTATACAAAATGTGAAGGGTTCTCTAGCCGTACCACAAAAA
TCTGCGGAATCCCCGGTTGAATCAACTAGTTCCGAAACAAAAGATTCCCACAAAAAATAT
TATTATACTGTAACGGGGGTATCATCTCGAAAATCTAGCCCGATTACAAGGGTTATGGAT
ATATTTAGAAGTAAGCCTCATCCACAGACAGAACCAAGTACGGCCGACAATACGAAAAAA
AAGAGTTCGAAATCTGCTCGCCGCTCGTCTATAGGAACGACTTCACCTACGTATCATAAG
AATTCTTACGCCTCGTTGGATCCTGTACAAGCCAAACAGTTGTTTAGAGAAGTTCGAGGC
TTACCGAAATATGATCCATATCTGTCCATTGTGCAAATATCAATAGGAGGTAGAGATAAA
ACCAGACTGCTATTGAATTTTTTTAAATATCACAAGTGCTACGAAATTTTACCCAAATCA
GCGAAAGTTATAATATTCGATACCCAATTTCCAGTTAGAAAAACTTTTCCAACTCTTGTA
TCTCACGGAATACGTTCGGCCCCGTTGTGGGACGCTAATAAAAAATTATTAGTGGGCATG
ATAACTGTCACTGACTTTATTAGAATTCTTTTACATCTAGATAAAGAAAATTTATCAATG
GAAGACTTAGAAAAGCATACTCTTCATAATTGGAAAAAGATTCTGAGGCCCACTAGGAAG
CCTTTGTGTAGCGTGGGACCAGATGAATCCTTGCACGAAGCAATCAATATGCTCAGCAAG
AATAGAGTTCATCGTTTATTAATGATCGATCCTGTATCTGGGGATGTGTTATATATATTG
TCACACAAAAGAATTTTACGCTTCCTATTTGTTTATCTGAATGAGTTCCCGGAGCTTACG
TTTTTCCACAAAACATTACTCGATCTGAATATTGGAACGTTTGATGGAATCATATCCGTC
ACAGATGACACCAGCGTTAAAGAAGCTTTTCAGCTTCTTTTAGATAATGATATATCTGCC
TTACCTATTCTGGACGAGAACGGCGTACTTTTAAATGTCTATCCAAAATATGAAGTGTTG
AATTTAGTGAGTGAGAAGTTATACTTGAACTTGTCGTTAACAATAGGAGACGTGCGCAAC
AAAAAGAAAGACTGGGAAGAGAAGCTACAGAAATGTTCTTCCACCATAACACTTTACGAG
GCCTTAGAAATAATTGTTAGAACTGAAAGCCATCGATTATTATTAGTGAATAAGGACGAT
AAGCTGGCGGGGGTCGTTTCGCTATCTGATATATTAGTCTACCTTAATAGGATAATACCC
GCCGAGAAGAAGGTTTCATCTCTCCAAGAAATATTTAGACCATTAGAAGTTAATAAGGTC
CCTGAATCTTTGAAAGAGAGCGAAAACGAAGTGATAACTATAAATGTACCTATCATTGCA
ACAGCGCAGAACGTACCTGAGTTGAACGAAGCCAATGATGTATGTATTGGTGATAATTCT
AATGAAACTAATATAAATAGTGAAATTGAAACTAATGAACAGTCCGCTGAAGCTAGTGAT
GCTAAGGATGCAGAGGCGGACGCGGACGTCCAACAATCTCAGACGGATGTAGCTGTAGAT
AATGACGAGTCATAA
Protein sequence:
MDPILENESATTESSSKHGKNKHRNKKKKSNQEMQNENQTVVGEKKKFVVTTLSGSNEQN
ISEGYAQSNVHTIHFGTRGAESQRPHVRSIFKDRPPETSRPSSAERDQISKGKEYETFHG
TSSSPRSSIFDIFRIRRKSDSKKHQSLIQNVKGSLAVPQKSAESPVESTSSETKDSHKKY
YYTVTGVSSRKSSPITRVMDIFRSKPHPQTEPSTADNTKKKSSKSARRSSIGTTSPTYHK
NSYASLDPVQAKQLFREVRGLPKYDPYLSIVQISIGGRDKTRLLLNFFKYHKCYEILPKS
AKVIIFDTQFPVRKTFPTLVSHGIRSAPLWDANKKLLVGMITVTDFIRILLHLDKENLSM
EDLEKHTLHNWKKILRPTRKPLCSVGPDESLHEAINMLSKNRVHRLLMIDPVSGDVLYIL
SHKRILRFLFVYLNEFPELTFFHKTLLDLNIGTFDGIISVTDDTSVKEAFQLLLDNDISA
LPILDENGVLLNVYPKYEVLNLVSEKLYLNLSLTIGDVRNKKKDWEEKLQKCSSTITLYE
ALEIIVRTESHRLLLVNKDDKLAGVVSLSDILVYLNRIIPAEKKVSSLQEIFRPLEVNKV
PESLKESENEVITINVPIIATAQNVPELNEANDVCIGDNSNETNINSEIETNEQSAEASD
AKDAEADADVQQSQTDVAVDNDES