| New model in OGS2.0 | DPOGS211225 |
|---|---|
| Genomic Position | scaffold93:- 49910-51343 |
| See gene structure | |
| CDS Length | 558 |
| Paired RNAseq reads | 269 |
| Single RNAseq reads | 1499 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003205 (1e-75) |
| Best Drosophila hit | CSN8 (8e-20) |
| Best Human hit | COP9 signalosome complex subunit 8 isoform 1 (7e-35) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC030655 [Tribolium castaneum] (3e-55) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC030655 [Tribolium castaneum] (2e-53) |
| GeneOntology terms | GO:0008150 biological_process GO:0003674 molecular_function GO:0008180 signalosome GO:0005634 nucleus GO:0005737 cytoplasm |
| InterPro families | IPR019280 COP9 signalosome, subunit CSN8 |
| Orthology group | MCL14622 |
Nucleotide sequence:
ATGATAAGCAACTTCGATAAGTTGTGTGGAGACTTAGAAAAACAGGAATTAGAGGCCCCA
AACGGAATAGCATCTTCCTCCACATATGCTCAACTATTAGCTATCTATTTATATCAAAAT
GATTTATGTAATGCTAAATATTTATGGAAAAGGATTCCTCAGAGTATAACGAGTAGCAAT
CCTGAAATTCCAGCTATTTGGGCTGTAGGACAGAAGTTATGGAAAAAAGATCTCGCCGGA
ACTTACCATGCACTGGCTGCGTTCACTTGGACTGAGCCTGTAGCTCATATTATACGAGCT
CTTGAAGAAAGAGTTCGTGAAAGAGCTTTCAACCTCATTGGACGTTCATACAGCACTGTT
TCTCTTGATACCATAGTGCTCATGACTGGTCTAAGTAGAGAGGCCGTGTTACAAATATGT
AGAGATAAGAAATGGGAGTTGCATTCAGATGGTGTAACTATAAGCCCTACACCGCCAGTC
CAACCATCTCCATTACATACCTCAAGTGAAGACCAATTGTTCAAGCTCACAGAGTTTGTA
TCTTTCTTAGAAAATTAG
Protein sequence:
MISNFDKLCGDLEKQELEAPNGIASSSTYAQLLAIYLYQNDLCNAKYLWKRIPQSITSSN
PEIPAIWAVGQKLWKKDLAGTYHALAAFTWTEPVAHIIRALEERVRERAFNLIGRSYSTV
SLDTIVLMTGLSREAVLQICRDKKWELHSDGVTISPTPPVQPSPLHTSSEDQLFKLTEFV
SFLEN