| New model in OGS2.0 | DPOGS211084 |
|---|---|
| Genomic Position | scaffold93:+ 139129-141215 |
| See gene structure | |
| CDS Length | 1719 |
| Paired RNAseq reads | 108 |
| Single RNAseq reads | 275 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002964 (0.0) |
| Best Drosophila hit | hormone receptor-like in 38, isoform B (7e-120) |
| Best Human hit | nuclear receptor subfamily 4 group A member 2 (2e-96) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP008334-PA [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP008334-PA [Tribolium castaneum] (3e-177) |
| GeneOntology terms | GO:0004879 ligand-dependent nuclear receptor activity GO:0005634 nucleus GO:0008544 epidermis development GO:0003707 steroid hormone receptor activity GO:0003700 sequence-specific DNA binding transcription factor activity GO:0008270 zinc ion binding GO:0006355 regulation of transcription, DNA-dependent GO:0043565 sequence-specific DNA binding GO:0006911 phagocytosis, engulfment GO:0042335 cuticle development |
| InterPro families | IPR001628 Zinc finger, nuclear hormone receptor-type IPR008946 Nuclear hormone receptor, ligand-binding IPR003070 Orphan nuclear receptor IPR001723 Steroid hormone receptor IPR013088 Zinc finger, NHR/GATA-type IPR000536 Nuclear hormone receptor, ligand-binding, core |
| Orthology group | MCL11792 |
Nucleotide sequence:
ATGCTACTGCTGCAAACACACAGCAACTACGGTTCGTCCTTCACTGATTTACCAAGCCTG
TTGCCACAGTATCAAGACGATTCAGCTGAAATCTTAGAAGAGAACTTGGACCCATTTCCT
GACGTCGAATTCCATGCGCCTATTCCTTTTGAAATTAAAGCACAACGTACTACTCCAGTA
AGTGAGACCCCGTCGCCTACCTTGGGCCCAGCGCTGCCTAGTTTCGAAGAAACATATTCG
GTTCGCTATCCAAAACAAGAAATGGCGGAATTTGGTCTTAAAATGGACGAAGACTGTTAC
AATGTCAGTGCTTATTCGCACCCTGGACATGCATCGACACAATTATTATATCAATATCAT
CAGCCGACTTTACCCTATGTTCCTTCACCATATTATGCGCCAGCTCAGCCCTGTTCGCCG
ACATTCGACACAGGTGGAGTTACTACTGCCCAGGATTCTTATTCTTTACCGCCTTTCCCA
AGTTCAGTTGACTTACACATATCTACAGAACAAGCTAACAGGCAAAGAAGATCATCATTG
CCCGTTCAACGTTCTGAATCTAACAGTTCCAACGATAGTCCCAAACTGCATGGAAGTCGA
ATCCATTGCATGCAAGCTTCAGCGCCGAGTTCTGCGTCTAGTTCACCTGGAGGTGTACCA
CAAGACAATAATGCATCTCGAGCTGCGCCACCATCACCCAGCCAACTATGTGCTGTATGT
GGAGATACTGCAGCGTGCCAACATTACGGCGTTCGAACCTGTGAAGGATGTAAAGGATTT
TTCAAAAGAACTGTTCAGAAAGGATCAAAGTACGTGTGCTTAGCAGAAAAGTCGTGTCCG
GTAGATAAAAGAAGAAGAAACAGATGTCAGTTTTGTCGTTTTCAAAAATGTCTTGCTGTT
GGTATGGTGAAAGAAGTAGTTAGAACAGATTCTTTAAAGGGCAGACGGGGACGATTGCCT
TCAAAACCAAAATGCCCTCAAGAATCTCCACCTAGTCCACCAATATCACTTATAACAGCA
CTAGTAAGAGCTCACGTAGACACATCTCCTGACTTTGCTAATCTTGATTACTCCCAGTAT
AGAGAACCAAATCCAATGGAACCTCCTATTTCGGATATAGAAGTAATCCAGCAATTCTAT
ACTCTACTATCCACATCGATCGATATGATAAAAGTTTTTGCTGAAAAGGTGCCAGGCTAC
GGCGATTTGTGCCCAGAAGACAGAGAGCAATTATTTGCATCAGCGCGACTTGAATTATTT
GTGCTCCGTTTAGCCTATCGCACTCGCCCTGATGATACTAAACTCACCTTCTGCAATGGC
TTGGTTCTCGACAAACGACAATGTCAACGATCTTTTGGGGACTGGTTGCACGCTGTACTC
GACTTCAGTAATACTCTGCACTCTATGGACATTGATATATCCACTTTCGCCTGTCTTTGT
GCGTTGACATTAATTACAGAGAGACATGGCTTAAAAGAGCCGCATCGTGTTGAACAATTG
CAAATGAAGATAATCGGATGTCTTCGGTCTCACATGCCAGGCGGGGGCGCGGCCAGTGCC
GCCGGCGCGCCTCACTTCAGCCGCGTCCTTGGGGCTCTACCCGAACTGCGCTCGCTTTCC
GTTCAGGGTCTTCAAAGAATCTTCTACCTGAAGCTTGAAGACTTAGTGCCAGCGCCGCCG
CTGATTGAAAACATGTTTCGCGCCAGTTTACCTTTCTAG
Protein sequence:
MLLLQTHSNYGSSFTDLPSLLPQYQDDSAEILEENLDPFPDVEFHAPIPFEIKAQRTTPV
SETPSPTLGPALPSFEETYSVRYPKQEMAEFGLKMDEDCYNVSAYSHPGHASTQLLYQYH
QPTLPYVPSPYYAPAQPCSPTFDTGGVTTAQDSYSLPPFPSSVDLHISTEQANRQRRSSL
PVQRSESNSSNDSPKLHGSRIHCMQASAPSSASSSPGGVPQDNNASRAAPPSPSQLCAVC
GDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLAEKSCPVDKRRRNRCQFCRFQKCLAV
GMVKEVVRTDSLKGRRGRLPSKPKCPQESPPSPPISLITALVRAHVDTSPDFANLDYSQY
REPNPMEPPISDIEVIQQFYTLLSTSIDMIKVFAEKVPGYGDLCPEDREQLFASARLELF
VLRLAYRTRPDDTKLTFCNGLVLDKRQCQRSFGDWLHAVLDFSNTLHSMDIDISTFACLC
ALTLITERHGLKEPHRVEQLQMKIIGCLRSHMPGGGAASAAGAPHFSRVLGALPELRSLS
VQGLQRIFYLKLEDLVPAPPLIENMFRASLPF