| New model in OGS2.0 | DPOGS211085 |
|---|---|
| Genomic Position | scaffold93:+ 146298-149023 |
| See gene structure | |
| CDS Length | 1977 |
| Paired RNAseq reads | 274 |
| Single RNAseq reads | 696 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002965 (0.0) |
| Best Drosophila hit | CG7371 (0.0) |
| Best Human hit | vacuolar protein sorting-associated protein 52 homolog (0.0) |
| Best NR hit (blastp) | PREDICTED: similar to CG7371 CG7371-PA [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to CG7371 CG7371-PA [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0010008 endosome membrane GO:0015031 protein transport GO:0005768 endosome GO:0016020 membrane GO:0005794 Golgi apparatus |
| InterPro families | IPR007258 Vps52/Sac2 |
| Orthology group | MCL10580 |
Nucleotide sequence:
ATGACCGAAATAATTGATAAAAATTTAGAAGATATAGAAATCCAGGAAGTACTGAAAAAT
GGTACGGACTTAAGGGAATATGCATTACAAATCGATAAAAGTATCAAAGAAGCAGAAAAA
GATTCTGTTGCTGATTATCTAAAGGAAAGTGAAAATATCTCATCATTACATAGTCAAATC
GAAGATTGTGATGGAATCCTTGCTCGCATGGAAAGCATGCTGTTGGTTTTTCAGAATGAT
TTGGGAAGCATAAGTAATGAAATTATTAGCTTGCAAAAACGTTCTGTTAATATGTCCGTT
CAACTTTCCAACCGTCAAGCACTTAAAGGTCCACTGTCATCATTCATAGAGGATATTGTA
GTCTCCGAAACTCTTATTTTTGGTATCAACAACGTTCCTGTAGTTGACAAAGAATTCATG
ATACAACTGGCTATACTGAACCAAAAACTTAACTTTGTAAAAGAACAAGAATTCAAAGAG
ACGAAAGCATGTCATGATGTTAAGGACATCTTGGAAAAGTTGAAAATCAAAGCTGTGGCT
AAGATAAGGACATATATATTGGAACAGATATATAAATTTCGGAAACCGATGGCCAACTAT
CAAATCCCACAGAATGCAATGTTAAAATATAAATTCTTTTTTGAATTCATATTATCCAAT
GAGAGAAATGTCGCACAGGAAATTTGCAATGAATACATTGATACATTGAGCAAAGTCTAC
TACTCATACTTCAAGTCTTATGCTTCTAGATTAGATAAATTGAAATATGAAGAAGTTCCC
ACAAAAGATGATCTAATGGGCATAGAGGATGGCTCGAAAGGGGGTTTCTTTCAAAAATCC
AATCTTAAAAATAAAAGCACTATATTCACTATTGGTAATAGAGGCGATGTGCTCGCTCAA
CAATTAGAGGCTCCTATAATTGTTCCTCATGTGCAACAAAAGACAAAGTATTCCTATGAA
GCACTCTTCAGAAGCTTACAATATGCGTTAGTGGACAACAGTTGCAGGGAATACTTGTTT
ACAACGGAATTTTTCCATGTAAAAGGCAGTCATGCTCAGGAATTGTTCGACAGGATACTT
GGCAGAACACTGTCTTTACTTGTGAAAAATGTTGAGAACTATGTGTTGGAGTGTTATGAT
TGTCTCGCGTTGTTTCTATGCATACAACTTATAAATAGATATCGATGGATGTGTCACAAG
AGAGCTGTAGCCGCATTGGACAGTTACTGGGATTCCTTATTGGGGACACTTACACCCAGA
TTGGAATACATTCTTAAACTGAACATTCAAAGTGTCAGAGATTGTGATCCAGCCAAGTTA
TCAAATAAAGAGATGGGACCTCATTATATAACAAGGAGATACGCTGAATTTTCTGCGGCA
ATGCTCAGTTTGAGCGAGCAGTTTCCCAATGAAGAGCAAAGTAACCTTCTACTTGCAATG
CAAGACGAAGTACATTGTTTCTTGTTAAAGATGGCGGCTGAATTCCCTCAGAGAATACAG
CAATTGATATTTTTGATAAACAATTATGATATGGTCTTGAATATTTTAATGGAAAGAACC
AGAGACAATACAAAGGAGGCGGAAAGTTTTAAGGAGCAATTACAAGCTAGAAGCTCAGAG
TATGTCGAAGAAATACTCAGCCCACATTTTGGAGGTCTCATGCAGTTTGTTAAGGAAGGG
GAACAATTACTTGAAAGTGATAAAAAGAATGAACTTGCGAATTTGGAAAAGAAATCCTTG
TCGCTGGTCACATCTTTTACAACGAGTTGGAAGCAGAGTCTTGAAGAAATACACAGAGAA
GTGCTGGTGTCATTCCCGAATCTAGTTACCGGCTCGGGTTTATTACAAATGGCTCTAACA
AATTTTGTTCAGTATTATCATAAGTTTGTTAAACTCCTAACCCCTAATGCACGCACCCAA
CTTGTAAATATTCATGTTATAATGGTTGAAATCAAGAAATATAAAACAAATTATTGA
Protein sequence:
MTEIIDKNLEDIEIQEVLKNGTDLREYALQIDKSIKEAEKDSVADYLKESENISSLHSQI
EDCDGILARMESMLLVFQNDLGSISNEIISLQKRSVNMSVQLSNRQALKGPLSSFIEDIV
VSETLIFGINNVPVVDKEFMIQLAILNQKLNFVKEQEFKETKACHDVKDILEKLKIKAVA
KIRTYILEQIYKFRKPMANYQIPQNAMLKYKFFFEFILSNERNVAQEICNEYIDTLSKVY
YSYFKSYASRLDKLKYEEVPTKDDLMGIEDGSKGGFFQKSNLKNKSTIFTIGNRGDVLAQ
QLEAPIIVPHVQQKTKYSYEALFRSLQYALVDNSCREYLFTTEFFHVKGSHAQELFDRIL
GRTLSLLVKNVENYVLECYDCLALFLCIQLINRYRWMCHKRAVAALDSYWDSLLGTLTPR
LEYILKLNIQSVRDCDPAKLSNKEMGPHYITRRYAEFSAAMLSLSEQFPNEEQSNLLLAM
QDEVHCFLLKMAAEFPQRIQQLIFLINNYDMVLNILMERTRDNTKEAESFKEQLQARSSE
YVEEILSPHFGGLMQFVKEGEQLLESDKKNELANLEKKSLSLVTSFTTSWKQSLEEIHRE
VLVSFPNLVTGSGLLQMALTNFVQYYHKFVKLLTPNARTQLVNIHVIMVEIKKYKTNY