| New model in OGS2.0 | DPOGS207490 |
|---|---|
| Genomic Position | scaffold130:- 119577-140153 |
| See gene structure | |
| CDS Length | 2127 |
| Paired RNAseq reads | 896 |
| Single RNAseq reads | 2046 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000963 (3e-09) |
| Best Drosophila hit | tenascin accessory, isoform E (0.0) |
| Best Human hit | teneurin-3 (2e-109) |
| Best NR hit (blastp) | type II transmembrane protein [Culex quinquefasciatus] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to Tenascin major CG5723-PB isoform 1 [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0005578 proteinaceous extracellular matrix GO:0007155 cell adhesion GO:0005576 extracellular region GO:0007160 cell-matrix adhesion GO:0005886 plasma membrane GO:0007366 periodic partitioning by pair rule gene |
| InterPro families | IPR013032 EGF-like region, conserved site IPR000742 Epidermal growth factor-like, type 3 IPR006210 Epidermal growth factor-like IPR013111 EGF, extracellular |
| Orthology group | MCL10165 |
Nucleotide sequence:
ATGACGATGAAATCGCTGAAGTACAGCGAAAGGGAGGATATGATGGAAGGCTTTAGCCCG
GTCCCTCCGCCGCTGCCGCGTCGTCAGCCCGTCAGGAATATTTACGCAGAGCCCTTCGTT
GATCCTAGAATGGGTGGAACTGGTATGACAAGCGGAATGGGTGGTGGTACTCTGGGCCAC
TGTCAGCTGGCAAACCAGCCCCTGGTGATGCCAGGGTTTCCTTTGCGAGCCAGCCAACCG
AGCCCTGTTCCAATGTACTCGCCTTCAAGATTCCATATAGACAAGCGATGTCAACACCGA
TGCACATGGAAATGTCTAGCCATAGCCATGATTTGCCTGTGTGTCATTCTTGCGGCCATG
CTAGCCTACTTTATAGCATTATCGTCAATTAAAAGTAATATAGACAATTCAAACTGTATT
CTGGTACAAGACGTAAAGGCAGTAACCCATTCTCACGGTGTTAGAGACGCTCTTTCGACA
TCCTCACCATCGGACGAATCTATATCAACATCATCATTGGGAGGCTGGTCAACAACTGCG
GAGGCTGCACTTGAATCTGCAGTAATACCACAGCAAGCGCAACAAGCAGCTCCACCTCCT
TGGACTCCAGCTTTAGAACTTAGAGAATTTGATGAATTACACAGTGTTACAATACCTGCT
TATCAGTTTTGGAGTTCTGAATTTCGTAACAAACAACCGGCGTTCGTCAGTCTTAACTTC
ACCGTTCCTTGGGGAGCTAATTTCGCTGTCTATGGTAGAAGAAACGTTGCTCCTAGTGTA
ACCCAATACGATTTTGTTGAATTTATCCGTGGTGGTAGAGTTGATCACAGACTACGAAAA
AGAAGAAGTCTACACGAATCAGACCCACATGATCATGGTTTTAACGGCTTTGAGTCATTG
TTTAGTACATTTAGCCCATTTGATAGATGGAACCACACGATAATCAAGAGATCTACAGAT
ATGAGGGTTAATGTCAGTATTATTCAATATCTTGATACTGGTAGATGGTTCATATCGATA
TATAATGACGAACTTCAGCCACACCACGTTGAAATGATTGTCTCAGAAGCTGAAGGGGTG
ACAAACTCTTGCCCTGATGACTGTTCTGGTCACGGTTCTTGCTATTTAGGAAAATGTGAA
TGTATGGATGGTTTTGAAGGTCACGATTGTTCAAAAAGTGTATGTCCTGTTCTGTGTTCT
GGACACGGTGCCTACGCTGGCGGGATTTGTCATTGTTCTGAGGGATGGAAAGGAGCTGAA
TGTGATGTACCAGCTCACGATTGTGAACCAGCAGATTGTTCTGGTCGGGGGCAATGCATA
GCAGGCCAATGTCAATGTAAAGCAGGATGGAAAGGAGCAAAATGTGATGAAGAGGATTGC
TTGGATCCAACGTGTGGTGGTCATGGATCTTGTGTTCGCGGTCGATGCGTCTGTCGCGCT
GGTTGGCGTGGAGCAGCTTGTACTGAACGCGATGCTCGTGTACAACGTTGTCTGCCAGCA
TGTTCTCAAAGAGGCGTGTACGACTTAGATGCTGGAAGATGTGTTTGTGATCCCTTGTAT
ACAGGCGACGATTGTTCTCAAGTGGTATGCTCGTTGGATTGCGGACCTCACGGTGTTTGT
GCTGAAGGAGTATGTCGTTGTGATGATGGGTGGACCGGTTCATTGTGTGACCAACGACCA
TGCGATATTCGCTGTCATGAACATGGTCAATGCAAGAACGGTACTTGTGTTTGCACACAA
GGTTGGAATAGTAAACATTGTACACTGCCCGGTTGTCCAAACGGATGCTCTCGACACGGC
CAATGCCTACTGGAGGAAGGAGTCTACCGATGTTCCTGTGCAGATGGCTGGGCTGGCACA
GATTGTTCTATTGAGTTGGAACTATCCTGCAACGACAATGAAGACAATGACGAAGATGGC
ATGACGGACTGCTCGGACTCTGAATGCTGCAGCCGCCCAGAATGTTCTGAGCACATTATG
TGCTTAGCTTCCAATGATCCTGTAGAAGTATTACTTCGTAAGCAGCCTCCATCCGTCACA
GCTTCCTTCTATCAACGTGTCAAATTTCTTATTGAAGAAAACTCAGTACAGAGTTACGCG
CACATGGACGAATATTCTGAAAGGTAA
Protein sequence:
MTMKSLKYSEREDMMEGFSPVPPPLPRRQPVRNIYAEPFVDPRMGGTGMTSGMGGGTLGH
CQLANQPLVMPGFPLRASQPSPVPMYSPSRFHIDKRCQHRCTWKCLAIAMICLCVILAAM
LAYFIALSSIKSNIDNSNCILVQDVKAVTHSHGVRDALSTSSPSDESISTSSLGGWSTTA
EAALESAVIPQQAQQAAPPPWTPALELREFDELHSVTIPAYQFWSSEFRNKQPAFVSLNF
TVPWGANFAVYGRRNVAPSVTQYDFVEFIRGGRVDHRLRKRRSLHESDPHDHGFNGFESL
FSTFSPFDRWNHTIIKRSTDMRVNVSIIQYLDTGRWFISIYNDELQPHHVEMIVSEAEGV
TNSCPDDCSGHGSCYLGKCECMDGFEGHDCSKSVCPVLCSGHGAYAGGICHCSEGWKGAE
CDVPAHDCEPADCSGRGQCIAGQCQCKAGWKGAKCDEEDCLDPTCGGHGSCVRGRCVCRA
GWRGAACTERDARVQRCLPACSQRGVYDLDAGRCVCDPLYTGDDCSQVVCSLDCGPHGVC
AEGVCRCDDGWTGSLCDQRPCDIRCHEHGQCKNGTCVCTQGWNSKHCTLPGCPNGCSRHG
QCLLEEGVYRCSCADGWAGTDCSIELELSCNDNEDNDEDGMTDCSDSECCSRPECSEHIM
CLASNDPVEVLLRKQPPSVTASFYQRVKFLIEENSVQSYAHMDEYSER