New model in OGS2.0 | DPOGS200862  |
---|---|
Genomic Position | scaffold585:- 15075-25918 |
See gene structure | |
CDS Length | 2520 |
Paired RNAseq reads   | 798 |
Single RNAseq reads   | 2050 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009850 (0.0) |
Best Drosophila hit   | CG4966, isoform B (1e-104) |
Best Human hit | Hermansky-Pudlak syndrome 4 protein isoform a (4e-15) |
Best NR hit (blastp)   | PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] (1e-139) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC002372 [Tribolium castaneum] (5e-123) |
GeneOntology terms    | GO:0006810 transport GO:0006231 dTMP biosynthetic process GO:0005549 odorant binding GO:0050797 thymidylate synthase (FAD) activity GO:0050660 FAD binding GO:0031902 late endosome membrane GO:0070923 siRNA loading onto RISC involved in chromatin silencing by small RNA GO:0060967 negative regulation of gene silencing by RNA GO:0035280 miRNA loading onto RISC involved in gene silencing by miRNA GO:0005765 lysosomal membrane |
InterPro families   | ND |
Orthology group | MCL16507 |
Nucleotide sequence:
ATGGCAAAGGAAATGATGATAGTATTCGTGTATGACACACAATGCTGTCTCTCCGAGGAG
GACGATCCCGCTGATGCTGTACTGTACTTTCATCCTGGCTGGGTGTCTGACACACAGAGA
CTGGCGCTGGCTGGACAGGTCGTTGGTGTGGCTCACTGTACCAAATCACTGTTCTCTCAG
CCGCTGGCCATAACGCTGCAGAGCGGCAAGTTCATCATCAGAGAATACGGCAGATACATA
CTGGCGATAGGCAGCGATAGGAACATCCCCGACTGGGTGTTGAAGAACCGCGCCAGTCTG
CTGACGTCCATGATAAGAGTGTACCACGGAGACCTGCAAGCGCTGGCCGACGCTATGGAA
GACAGCCGCCGCCTGGCGGAGAAGATGTACCAGATCTTTGAGACCTACTTACCCGTCTTA
CAATACGGATGTCATATATTCCAGCGAGTGCCCATGCTGAGCCTTCCTAAGAGCGCGACA
TCGGTTTATATGGAATCCATGCAGATATTGGAACACTGCCGACGGAGCAGGGGCGTGCTG
GGAGGCGTCATACTATATAATAATAAAATAATTTCCACGCAACTCCCTCCAAGTCTGACC
TCATACTTGACGGTAGTGGACCCGTATAGGATTAAATCCCCAGCTGAAAACCTGAAGACG
AAGGTTCCGCTACCGCTCGGCGCTCAGCTGCTAGTGGTTTATGTCGGCAAGAAAACTTAT
TACAATTTGAAAAAACAAGCCGACAAACTGCAAGAGTTTTACCAGAAGGGAGAGGAAATG
ATCGCCCGATTCAAGAAGATGCAAGAGGCGGAAAGAGAGAGAGTCCGCGATCATCCTCAG
TCGGGCATGAAGCGGGATAAATCGTTACTGTTCACGGCTGTACCGGAGGAAGACCACACC
ATGATATCGCCGCCGAACAGAGAAGAAGGTTCCGTACCACGGAAACCCAGCATGCCGGAT
GTCGTTCCGTTCACAAACAAACCACGGCCGAGACCTAACAAACTATCGCTGACCTTCAAA
ACTCAGAAGTCTTTGGACGAGGACGTTAAAGAGAACGAAGTCAGCGAGAAAGTGTTCACG
GGACAGACGAGCGTCGTGTCGACACCCATGGTCGATTACAAGCGGCTCCACGGGAACATG
CTGTCCATATGTCAGAACCCGGACGCTGATGAGAAACTGGAACTAGAGCCGGACGTCGTC
AAAACAGACAGCAGCATGACAACGGCCGACAGGAGGGACAGAGTAATCCTAGACGGCAAC
AGCATCGGGGAACATTTCATTAACAAGCCGGAACCGATGAGGAAGTTGGCGAGCGTTACG
GACCTGCAGGAGACCTTTAGGAAACTGTCGACCAGAGCTTCCTCTAATATGAAGCTCAAG
AGATCCAAAATGGAAGACGAGTCGACACCCTCGCCGGAAACGAAGGGGCAGAATACTATG
ACCATCAACGATCCACTGTTTCCGGTTTTCAGAAACGACGGCGTTGCCATATCAGAGTCG
CTCTTCAACCAGTACCTGGAGCAGTATTATTCTGGCATTAAACATTCCAAGGAAGATAGC
GTGTTCAATTTTAATCATAAGTTAGGCGAGTTAGACAAGTTTAAAGATTTCGATTCGGAA
CTAATGAAGTCTCCGCAAAGAACCCCGAAAAGGGTGGCGAAGGATTCGTCGAATACGGTG
CAAACGGACCAGTCGAGGCGGAAAACACTGTCGCTGCCTTTAAAGTCGCTCTCGGAAAAT
TCAGAAACGCAGATAGACACGGGCGCAGACACATTGAGTTTTAAAAAGAAGCTATCGGGA
GTCCAGTTGACGCCGCTCATGGAGAAGCTGAGCCACTTAGCGTTCTCAGACAAGTCCAGC
GGATACAGCAGCAGGGTCATGACGCCCTTGGAGCTGAGGGAGTTACTGACACCGGCTCTA
GAGAAACAAGTCACATTCACTGAAAGGAAGAGGTCCCGCCTCGAGGACAGTTCGGAGTCG
GAGTCGGACGGCGAGTGCGACGTGGACTCCCTGCCTTCCTACAGCTCTCAGTCCGTGAGG
TGCGCGCTGTTCGTCAGCGGACTACACAACATGGCGCTGCTGGAACTGCTGGACCTGGAC
GCCGCCGACGACACACAGACCATCAACACGCTCTGGGAGGCTTCTCTTAACGCTCTGGGT
CCGATCGAGCAGAAGTGTATGGAGCCGCCGACCACGGAGCCCGACTCGACCGACTACAGT
TACCTGTTGCTGGACCCCGACTGGGGCACCGTCAAGAAGGGCGGCCCATGGGCGGCGTTA
GACATCGCTACCATGGGCTATATACATAACGAGTTCGAGGAACAACCCGATTTGACAGAG
TTCATATTGAGGAGTGAAGACAGCGTGGTGTTGGGTGCCAGCTGCGGCCGAGCGCAGGTG
TTCTACCAGGAGAGCGGAGCGCGCGCCCCCGGGCCTCCGCCCCCGTCCGACCTGCTGGCC
GCCGCCCCGCTCAGGGCGCGCCGCCGCCTCCACCGAGACCACTCCACACTCATACTGTAG
Protein sequence:
MAKEMMIVFVYDTQCCLSEEDDPADAVLYFHPGWVSDTQRLALAGQVVGVAHCTKSLFSQ
PLAITLQSGKFIIREYGRYILAIGSDRNIPDWVLKNRASLLTSMIRVYHGDLQALADAME
DSRRLAEKMYQIFETYLPVLQYGCHIFQRVPMLSLPKSATSVYMESMQILEHCRRSRGVL
GGVILYNNKIISTQLPPSLTSYLTVVDPYRIKSPAENLKTKVPLPLGAQLLVVYVGKKTY
YNLKKQADKLQEFYQKGEEMIARFKKMQEAERERVRDHPQSGMKRDKSLLFTAVPEEDHT
MISPPNREEGSVPRKPSMPDVVPFTNKPRPRPNKLSLTFKTQKSLDEDVKENEVSEKVFT
GQTSVVSTPMVDYKRLHGNMLSICQNPDADEKLELEPDVVKTDSSMTTADRRDRVILDGN
SIGEHFINKPEPMRKLASVTDLQETFRKLSTRASSNMKLKRSKMEDESTPSPETKGQNTM
TINDPLFPVFRNDGVAISESLFNQYLEQYYSGIKHSKEDSVFNFNHKLGELDKFKDFDSE
LMKSPQRTPKRVAKDSSNTVQTDQSRRKTLSLPLKSLSENSETQIDTGADTLSFKKKLSG
VQLTPLMEKLSHLAFSDKSSGYSSRVMTPLELRELLTPALEKQVTFTERKRSRLEDSSES
ESDGECDVDSLPSYSSQSVRCALFVSGLHNMALLELLDLDAADDTQTINTLWEASLNALG
PIEQKCMEPPTTEPDSTDYSYLLLDPDWGTVKKGGPWAALDIATMGYIHNEFEEQPDLTE
FILRSEDSVVLGASCGRAQVFYQESGARAPGPPPPSDLLAAAPLRARRRLHRDHSTLIL