| New model in OGS2.0 | DPOGS200836 |
|---|---|
| Genomic Position | scaffold585:+ 87615-87983 |
| See gene structure | |
| CDS Length | 369 |
| Paired RNAseq reads | 93 |
| Single RNAseq reads | 357 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009893 (4e-54) |
| Best Drosophila hit | Rrp40 (2e-33) |
| Best Human hit | exosome complex exonuclease RRP40 isoform 1 (6e-25) |
| Best NR hit (blastp) | exosome complex exonuclease Rrp40 [Bombyx mori] (7e-55) |
| Best NR hit (blastx) | exosome complex exonuclease Rrp40 [Bombyx mori] (3e-54) |
| GeneOntology terms | GO:0000176 nuclear exosome (RNase complex) GO:0006364 rRNA processing GO:0000178 exosome (RNase complex) GO:0000175 3'-5'-exoribonuclease activity GO:0003723 RNA binding GO:0005737 cytoplasm |
| InterPro families | ND |
| Orthology group | MCL12123 |
Nucleotide sequence:
ATGGGAGATATTGTTTACGCCAAAATGCTGGTAGCTAGTAAAGATATGGAACCAGAGTTA
GTTTGTGTCGATTCACATGGAAAAAAAGGGCGCTTAGGCGTGCTAAGTGATGGATTCTTA
TTTAAATGTTCTTTAAATTTAGTACGAAAAATATTGAACCCTTCATGTCCCTTACTTGAG
TCCTTGAAAAATGAATGGCCTTTTGAGATGGCAGCTGGCATGAATGGTAGGATTTGGATC
AAAGCTAACTCCATGAGAGAAACAATTGCTCTTGGTAATGCTATTTTGGGCGCAGAATAT
CAAAGTGATGAAGAAATTAAACTAATATGTTCTAACATAGCTTCTATATTAGCAGGACAT
ATTTCGTGA
Protein sequence:
MGDIVYAKMLVASKDMEPELVCVDSHGKKGRLGVLSDGFLFKCSLNLVRKILNPSCPLLE
SLKNEWPFEMAAGMNGRIWIKANSMRETIALGNAILGAEYQSDEEIKLICSNIASILAGH
IS