DPGLEAN00080 in OGS1.0

New model in OGS2.0DPOGS214955 
Genomic Positionscaffold1723:+ 7526-14298
See gene structure
CDS Length963
Paired RNAseq reads  1648
Single RNAseq reads  4743
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA004852 (6e-138)
Best Drosophila hit  sec23, isoform B (1e-155)
Best Human hitprotein transport protein Sec23A (2e-141)
Best NR hit (blastp)  PREDICTED: similar to protein transport protein sec23 [Tribolium castaneum] (7e-166)
Best NR hit (blastx)  PREDICTED: similar to protein transport protein sec23 [Tribolium castaneum] (5e-160)
GeneOntology terms






  
GO:0000139 Golgi membrane
GO:0005515 protein binding
GO:0006886 intracellular protein transport
GO:0006888 ER to Golgi vesicle-mediated transport
GO:0008270 zinc ion binding
GO:0016044 cellular membrane organization
GO:0030127 COPII vesicle coat
GO:0048471 perinuclear region of cytoplasm
InterPro families

  
IPR006900 Sec23/Sec24, helical domain
IPR007123 Gelsolin domain
IPR012990 Sec23/Sec24 beta-sandwich
Orthology groupND

Nucleotide sequence:

ATGAGCACTACAATGGCTATCTTCTTTGAGGTGGTAAACCAGCACACAGCGCCCTTACCA
GCAGGTGGTCGCGGCTGTGTCCAGCTCATCACGCAGTACCAGCACTCCAGCGGGCAGAGA
CGCGTCAGGGTCACTACCATTGCTAGAAACTGGGGCGATGCTGCCGTCAACCTTCATCAT
ATATCAGCCGGCTTCGACCAGGAAGCCGCCGCGGTAGTGATGGCCCGCCTCGTGGTGTAC
CGCGCCGAACAAGAGGACGGACCGGATGTACTGCGCTGGTTGGACCGGATGCTGATACGA
CTGTGTCAGAAGTTCGGAGAGTATGCTAAGGATGATCCTAACAGTTTCCGTCTGTCAGAG
AACTTCAGCCTCTACCCTCAGTTCATGTACCACCTCCGGAGATCACAGTTCCTTCAAGTA
TTCAATAATTCACCCGATGAAACTACTTTCTACAGACACATGTTAATGCGTGAGGACCTC
ACCCAGTCCCTCATCATGATCCAGCCCATACTGTACTCCTACAGTTTCGGAGGTCCCCCA
GAGCCTGTTCTGCTGGACACTTCCTCCATACAGCCTGACAGGATACTGCTTATGGATACT
TTCTTCCAGATCTTGATATACCATGGAGAGACTATAGCCCAATGGAGGGCGCTGCGCTAC
CAGGACATGGCAGAGTACGAGAGTTTCGCCCAGCTGTTGAGGGCTCCTGTAGACGACGCA
CAGGATATCCTGCAGAACAGATTCCCCGTCCCTCGGTATATTGACACAGAGCACGGAGGT
TCACAGGCGCGATTCCTTTTATCGAAAGTGAATCCCTCAAGGACACACAACAACATGTAC
GCCTACGGTGGGGCGATGCCGATACCATCTGCGGACGGTGGCGCCCCCGTGTTGACGGAC
GATGTTTCACTGCAAGTGTTCATGGAGCACCTCAAAAAGCTGGCTGTCTCATCAACGGCG
TAA

Protein sequence:

MSTTMAIFFEVVNQHTAPLPAGGRGCVQLITQYQHSSGQRRVRVTTIARNWGDAAVNLHH
ISAGFDQEAAAVVMARLVVYRAEQEDGPDVLRWLDRMLIRLCQKFGEYAKDDPNSFRLSE
NFSLYPQFMYHLRRSQFLQVFNNSPDETTFYRHMLMREDLTQSLIMIQPILYSYSFGGPP
EPVLLDTSSIQPDRILLMDTFFQILIYHGETIAQWRALRYQDMAEYESFAQLLRAPVDDA
QDILQNRFPVPRYIDTEHGGSQARFLLSKVNPSRTHNNMYAYGGAMPIPSADGGAPVLTD
DVSLQVFMEHLKKLAVSSTA