New model in OGS2.0 | DPOGS214955  |
---|---|
Genomic Position | scaffold1723:+ 7526-14298 |
See gene structure | |
CDS Length | 963 |
Paired RNAseq reads   | 1648 |
Single RNAseq reads   | 4743 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004852 (6e-138) |
Best Drosophila hit   | sec23, isoform B (1e-155) |
Best Human hit | protein transport protein Sec23A (2e-141) |
Best NR hit (blastp)   | PREDICTED: similar to protein transport protein sec23 [Tribolium castaneum] (7e-166) |
Best NR hit (blastx)   | PREDICTED: similar to protein transport protein sec23 [Tribolium castaneum] (5e-160) |
GeneOntology terms    | GO:0000139 Golgi membrane GO:0005515 protein binding GO:0006886 intracellular protein transport GO:0006888 ER to Golgi vesicle-mediated transport GO:0008270 zinc ion binding GO:0016044 cellular membrane organization GO:0030127 COPII vesicle coat GO:0048471 perinuclear region of cytoplasm |
InterPro families    | IPR006900 Sec23/Sec24, helical domain IPR007123 Gelsolin domain IPR012990 Sec23/Sec24 beta-sandwich |
Orthology group | ND |
Nucleotide sequence:
ATGAGCACTACAATGGCTATCTTCTTTGAGGTGGTAAACCAGCACACAGCGCCCTTACCA
GCAGGTGGTCGCGGCTGTGTCCAGCTCATCACGCAGTACCAGCACTCCAGCGGGCAGAGA
CGCGTCAGGGTCACTACCATTGCTAGAAACTGGGGCGATGCTGCCGTCAACCTTCATCAT
ATATCAGCCGGCTTCGACCAGGAAGCCGCCGCGGTAGTGATGGCCCGCCTCGTGGTGTAC
CGCGCCGAACAAGAGGACGGACCGGATGTACTGCGCTGGTTGGACCGGATGCTGATACGA
CTGTGTCAGAAGTTCGGAGAGTATGCTAAGGATGATCCTAACAGTTTCCGTCTGTCAGAG
AACTTCAGCCTCTACCCTCAGTTCATGTACCACCTCCGGAGATCACAGTTCCTTCAAGTA
TTCAATAATTCACCCGATGAAACTACTTTCTACAGACACATGTTAATGCGTGAGGACCTC
ACCCAGTCCCTCATCATGATCCAGCCCATACTGTACTCCTACAGTTTCGGAGGTCCCCCA
GAGCCTGTTCTGCTGGACACTTCCTCCATACAGCCTGACAGGATACTGCTTATGGATACT
TTCTTCCAGATCTTGATATACCATGGAGAGACTATAGCCCAATGGAGGGCGCTGCGCTAC
CAGGACATGGCAGAGTACGAGAGTTTCGCCCAGCTGTTGAGGGCTCCTGTAGACGACGCA
CAGGATATCCTGCAGAACAGATTCCCCGTCCCTCGGTATATTGACACAGAGCACGGAGGT
TCACAGGCGCGATTCCTTTTATCGAAAGTGAATCCCTCAAGGACACACAACAACATGTAC
GCCTACGGTGGGGCGATGCCGATACCATCTGCGGACGGTGGCGCCCCCGTGTTGACGGAC
GATGTTTCACTGCAAGTGTTCATGGAGCACCTCAAAAAGCTGGCTGTCTCATCAACGGCG
TAA
Protein sequence:
MSTTMAIFFEVVNQHTAPLPAGGRGCVQLITQYQHSSGQRRVRVTTIARNWGDAAVNLHH
ISAGFDQEAAAVVMARLVVYRAEQEDGPDVLRWLDRMLIRLCQKFGEYAKDDPNSFRLSE
NFSLYPQFMYHLRRSQFLQVFNNSPDETTFYRHMLMREDLTQSLIMIQPILYSYSFGGPP
EPVLLDTSSIQPDRILLMDTFFQILIYHGETIAQWRALRYQDMAEYESFAQLLRAPVDDA
QDILQNRFPVPRYIDTEHGGSQARFLLSKVNPSRTHNNMYAYGGAMPIPSADGGAPVLTD
DVSLQVFMEHLKKLAVSSTA