| New model in OGS2.0 | DPOGS215050 |
|---|---|
| Genomic Position | scaffold498:+ 50393-53793 |
| See gene structure | |
| CDS Length | 1113 |
| Paired RNAseq reads | 267 |
| Single RNAseq reads | 847 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005681 (3e-143) |
| Best Drosophila hit | CG10184 (6e-94) |
| Best Human hit | ND |
| Best NR hit (blastp) | GA10138 [Drosophila pseudoobscura pseudoobscura] (7e-111) |
| Best NR hit (blastx) | GA10138 [Drosophila pseudoobscura pseudoobscura] (1e-90) |
| GeneOntology terms | GO:0004793 threonine aldolase activity GO:0030170 pyridoxal phosphate binding GO:0006520 cellular amino acid metabolic process |
| InterPro families | IPR015424 Pyridoxal phosphate-dependent transferase, major domain IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase |
| Orthology group | MCL15604 |
Nucleotide sequence:
ATGGCGTACATAGTAGATTTACGATCAGATACCGTCACTAAGCCGACGGAGGCTATGAAG
CATGCTATGGTGAATTCGGCTCTGGGCGACGACGTGTTCGGCGAGGACCCCACTGTGAAC
GCGTTGGAGAGCAAAGTAGCCACCCTGCTAGGGAAGCAGGCCGCTCTATTTGTACCAAGT
GGTACCATGGCCAACCTTATTGCGATTATGGTCCATTGTAGCAAGCGAGGTGCTGAAGCC
ATTGTTGGCAATTTATCACATATTTATAAATATGAACAAGGTGGTGCAGCTCATGTGGCT
GGAGTATTGTTGAGTACAATACAGAACAAACCAGATGGAACATTTGACCTGGAAGAACTG
GAGAAACGGTTCCAGGGGTCAGATATACACTCACCCATCACATCTATGGTTGCCATAGAA
AATACTCACAATGTTTGTGGTGGAAAGGTGGTGCCACTTGAGTGGATGGAGCAGCTGTCA
GCTGTGTGTGTCCGACGCGGTGTTCCATTACACCTGGACGGAGCTCGTCTCGTGAACGCG
GCCACGTATCTCCAGGTGCCGCCCGCGCGTGTCGCCGCGTGCTGCGACAGTGTCGCCATC
TGCTTCAGCAAGGGACTGTCGGCGCCGGCCGGCTCGGCCCTGGTTGGATCATACAGCTTC
ATACAGCAAGCTCGTCGTATGCGTAAGATGCTAGGCGGCGGTATGCGTCAGGCGGGAGTG
TTAGCCGCGGCCGCTTTAGTGTCTTTGGACCAAGTGGTACCCCTACTGGCTTTGGACCAC
AAGCGAGCTGCCATCCTCGCTAAAGTGATCGAAGGTCTCTTCCTGCCTTGTTTCTCTGTG
GACGTAGAGGGTCAACACACCAACATAGTGCTAGTCCGAATCTCCCGGGAGACCAGTCTG
ACGGCGGACCAGGTGCTGCAGAGACTGGCCCAAGGTGACTGCAAGACGCCGAACGACGAA
GGCGTTATACTGAAGGCGATCTGTTTCGACGAGAAGACGATCAGAATGACGTTACACTGT
CAAGTGGACGACGAACAGCTGTGGCTGGCTATAATGAAGATAACTTATGTGTTCAAAGAA
CTTAACGCCTTATACCCCGTTAAAACAACATAA
Protein sequence:
MAYIVDLRSDTVTKPTEAMKHAMVNSALGDDVFGEDPTVNALESKVATLLGKQAALFVPS
GTMANLIAIMVHCSKRGAEAIVGNLSHIYKYEQGGAAHVAGVLLSTIQNKPDGTFDLEEL
EKRFQGSDIHSPITSMVAIENTHNVCGGKVVPLEWMEQLSAVCVRRGVPLHLDGARLVNA
ATYLQVPPARVAACCDSVAICFSKGLSAPAGSALVGSYSFIQQARRMRKMLGGGMRQAGV
LAAAALVSLDQVVPLLALDHKRAAILAKVIEGLFLPCFSVDVEGQHTNIVLVRISRETSL
TADQVLQRLAQGDCKTPNDEGVILKAICFDEKTIRMTLHCQVDDEQLWLAIMKITYVFKE
LNALYPVKTT