| New model in OGS2.0 | DPOGS213679 |
|---|---|
| Genomic Position | scaffold1035:+ 27783-28716 |
| See gene structure | |
| CDS Length | 858 |
| Paired RNAseq reads | 422 |
| Single RNAseq reads | 1100 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010316 (1e-120) |
| Best Drosophila hit | mitochondrial ribosomal protein L4 (8e-81) |
| Best Human hit | 39S ribosomal protein L4, mitochondrial isoform a (8e-61) |
| Best NR hit (blastp) | ribosomal protein L4 [Bombyx mori] (1e-121) |
| Best NR hit (blastx) | ribosomal protein L4 [Bombyx mori] (4e-116) |
| GeneOntology terms | GO:0005762 mitochondrial large ribosomal subunit GO:0006412 translation GO:0003735 structural constituent of ribosome GO:0019843 rRNA binding |
| InterPro families | IPR023574 Ribosomal protein L4 domain IPR013005 Ribosomal protein L4/L1e, bacterial-type IPR002136 Ribosomal protein L4/L1e |
| Orthology group | MCL13979 |
Nucleotide sequence:
ATGAGTTCAGCGTTAATAAACGCTATTAAAAGGCTTAACATATCTGTCCTTCCTCAAATA
CGTTTCTGCTCATTAACAGCTAACTCAAGTTCCGCTATAAACGTTATTAATAACGAAGTT
TCTGTCACCAAGAAAGAATGGAAGTTTCCACCATCGTATACAAAACCACGTGAAGTTTGG
ATTGAAAATTTGGATACAATTGAAGAAAAAAAAGTAGGATTATTTGAGCTTCATCCTTTA
GTATACGCTGCAGCTCCCCGTATAGATATAATCCATAAAAATGTTGTTTGGCAAAGAAAG
TATCGCTGGGTATCATGGGCCCACACTAAAACGCGGGCTGAAGTTAGGGGTGGAGGTAAA
AAACCATGGCCCCAAAAGGGTCTGGGTCGAGCCCGGCATGGGTCTATTAGGTCACCACTA
TGGCGTGGAGGTGGTATCGCACATGGACCACGTTCTGGAAAAACTCACTTTTATATGTTA
GATATATACTCAAGACTCCATGGCCTGACTTCAACATTATCAGCAAAGTTTGCACAAGAT
GATCTCCATGTTGTGAGAGATTTGGAACTACCTACTGATGAATCGGAATACCTCATTGAA
CTCATTGAGAAAAGAAATTGGGGTCCTTCAGTATTGCTTGTTGATGACACTGACTATGCT
CCTCGGAACATAACGGTTGCAACGGACAGTTTACAATATGTAAACATCATGCCTGTATAT
GGACTCAATGTTTATTCTATGCTAAAGCACGATACTCTTGTTTTAACTCAGGCAGCTGCA
GAAAAAATTGAAGAGAGAATTCTACATCACTTGAATTCTACTAAAGGTGTTAGCAAATTT
AAATTAAGTCAAGTTTAA
Protein sequence:
MSSALINAIKRLNISVLPQIRFCSLTANSSSAINVINNEVSVTKKEWKFPPSYTKPREVW
IENLDTIEEKKVGLFELHPLVYAAAPRIDIIHKNVVWQRKYRWVSWAHTKTRAEVRGGGK
KPWPQKGLGRARHGSIRSPLWRGGGIAHGPRSGKTHFYMLDIYSRLHGLTSTLSAKFAQD
DLHVVRDLELPTDESEYLIELIEKRNWGPSVLLVDDTDYAPRNITVATDSLQYVNIMPVY
GLNVYSMLKHDTLVLTQAAAEKIEERILHHLNSTKGVSKFKLSQV