| New model in OGS2.0 | DPOGS210177 |
|---|---|
| Genomic Position | scaffold5187:+ 14580-16558 |
| See gene structure | |
| CDS Length | 999 |
| Paired RNAseq reads | 121 |
| Single RNAseq reads | 359 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014138 (1e-89) |
| Best Drosophila hit | CG31549 (2e-07) |
| Best Human hit | carbonyl reductase [NADPH] 1 (2e-33) |
| Best NR hit (blastp) | unknown [Picea sitchensis] (4e-80) |
| Best NR hit (blastx) | unknown [Picea sitchensis] (4e-79) |
| GeneOntology terms | GO:0016491 oxidoreductase activity GO:0005488 binding GO:0055114 oxidation reduction |
| InterPro families | IPR002347 Glucose/ribitol dehydrogenase IPR016040 NAD(P)-binding domain IPR002198 Short-chain dehydrogenase/reductase SDR |
| Orthology group | MCL40947 |
Nucleotide sequence:
ATGGCACAAAAAGTCGCAGCTGTTACCGGTTCGAATAAAGGACTGGGTTTCTTCATAGTT
AAAAGACTGTGTCAGCACTTTGATGGAATTGTTTACTTACTAGCAAGGAATGAAGAAAGG
GGATTGGAGGCGGTAAGAAAATTGAATAAAATGGGATTAAAACCTGAGTTTCATATATTG
GATGTCAGTGATAAAGAAAGTATAAAGAAATTTGCTTATTTCATAAAAACAAAACATGGT
GGTCTGAATGTTCTTGTAAATAATGCAGCCGTTATGGATTATAAAACGGTTTATCCGTCT
TACGAAGGCGCCAAATACAATATCGACGTTAATTACAGAAGTTTACTAGACATTGAAAAA
TATTTATATCCTTTACTAAGAGATGGCGCTAGAGTTGTCAATGTGTCAAGCATGTGTGGC
CACCTTTCCAATTTACGCAACAAAAAGTGGCTAGATTCATTAACAAAAGAAGATTTAGAA
ACTGAAGATATCAATAATTTTGTTGATGATTATTTGAATAGCGTAAAGAATGGAACTTTT
AAAAAAGAAGACTTTGCTGATGAGGGTAAGCATGCAGAACATAGAGTATCTAAAATCGCT
ATGACAGCTTTGACAATGGTGCAACAAAGAAAATATAAGAATATATCTATAAACGCTATC
TATCCCGGTTACTTAAAAACCGATATGGCACCCAAAGGTGTAAAAGATCCAGAAGAAGCA
GCAGATGTTATTGTTTACCTTATTTTAGAAGCATCTCCTAATCTAAAAGGCACGTTTATG
TGGGACAACAAAAAATTGGTTGATTGGTACGACGTTGATGTGAAATCAGTTCGCATAATG
GCATCATTTGCGGCTCAGGCTGCACTACGATCTCGATGGAGTTCATTAATAGAGTCTACG
AGTGTCGATGTCCCAGGAGAAGTGACTGATGGTGTCCGTTCCGTTGTTGGATGGCTCAAA
CAGGCACGAATTAATGTTGTTTGGATGTTTCAGTATTGA
Protein sequence:
MAQKVAAVTGSNKGLGFFIVKRLCQHFDGIVYLLARNEERGLEAVRKLNKMGLKPEFHIL
DVSDKESIKKFAYFIKTKHGGLNVLVNNAAVMDYKTVYPSYEGAKYNIDVNYRSLLDIEK
YLYPLLRDGARVVNVSSMCGHLSNLRNKKWLDSLTKEDLETEDINNFVDDYLNSVKNGTF
KKEDFADEGKHAEHRVSKIAMTALTMVQQRKYKNISINAIYPGYLKTDMAPKGVKDPEEA
ADVIVYLILEASPNLKGTFMWDNKKLVDWYDVDVKSVRIMASFAAQAALRSRWSSLIEST
SVDVPGEVTDGVRSVVGWLKQARINVVWMFQY