| New model in OGS2.0 | DPOGS200863 |
|---|---|
| Genomic Position | scaffold2374:- 22663-25490 |
| See gene structure | |
| CDS Length | 1134 |
| Paired RNAseq reads | 1153 |
| Single RNAseq reads | 2839 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009851 (9e-152) |
| Best Drosophila hit | Valyl-tRNA synthetase, isoform A (8e-104) |
| Best Human hit | valyl-tRNA synthetase (2e-72) |
| Best NR hit (blastp) | valyl-tRNA synthetase [Culex quinquefasciatus] (4e-124) |
| Best NR hit (blastx) | PREDICTED: similar to GA17927-PA [Nasonia vitripennis] (1e-111) |
| GeneOntology terms | GO:0004832 valine-tRNA ligase activity GO:0006438 valyl-tRNA aminoacylation GO:0004818 glutamate-tRNA ligase activity GO:0005524 ATP binding GO:0005737 cytoplasm |
| InterPro families | IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding IPR002300 Aminoacyl-tRNA synthetase, class Ia IPR002303 Valyl-tRNA synthetase |
| Orthology group | ND |
Nucleotide sequence:
ATGTCAAAGTCTCTGGGGAATGTGATCGATCCAGTGGACGTGGTGAGGGGCATCACGCTG
GAACAGCTTCACCAACAGCTGGCGGACTCCAACCTTGACCCTCGGGAGGTGGACCGCGCC
AAGAAGGGACAGGCCCAGGATTATCCCAACGGTATACCGGAATGTGGCACGGATGCTTTA
AGGTTCGCCCTGTGCGCTATGACCGCCGGCCGCGACCTCAACCTGGACATCCAGCGCGTC
CAGGGCTACCGCTTCTTCTGCAACAAGCTGTGGAACGCTACCAAGTTCGCCATGATGTAC
TTCCCACAGGACACCCTGTATAAATGTCACAGCTCCCCGCTCTCCCCCGCCCTGTCCCCC
CTGGATCTTTGGATGCTGTCCCGTGTATCTCTGGCGGTGCAGAAGGTGAACTCCGGCTTC
CAGAACTACGACTTCCCATCAGCTACAACCCACTGCTACAACCTGTGGCTCTATGACTTG
TGTGATGTGTACTTGGAGTATCTGAAACCGGTGTTCACTCAGGGCAGCCCTGAGGCTCAG
ACTGCGGCCAGGCAGACTCTATACACAACCCTAGAGCTTGGATTGAAGCTGCTATCACCA
TTCATGCCCTTCATTACCGAGGAACTCTACCAGAGATTGCCACGAGAAGATAAATCTTGC
CCCTCTATATGTGTAGCAGATTACCCCACTGATGAAACCACAGCGTGGAGAAATGAAGAA
CTAGAGGCGAATGTAGAAACAGCTCTCAAAATCGTTCACCTCATTCGTTCGACTCGCTCC
GAATACAATTTGACGAACAAACAGCGGACCACCGTCCACGTGCTGACCGAAATGAATGAA
GTCAAGGAACTGTTCAGGAGCCTGCAGACGCTCGCCAACAGCGAGCTGAGCGACGACTCC
CCGCCCATGGGCTGTTCCATACTCACGGTGTCTGATAAGATCGAAGTGCATTTGGTACTG
AAGAAAGAGAATCTGTCACAAACCATAAACAAACTTCAGCAGGCCATGACGGCCGACGAC
TACACCGCCAAGGTACCGGCCGATGTGCGGAAGCTCAACTCGGAGAAGCTCGCCACCTCC
CAAGGAGAAATAGAGAGACTACAGTCCGCCATAGAAACGTTGAAACTTATGTAA
Protein sequence:
MSKSLGNVIDPVDVVRGITLEQLHQQLADSNLDPREVDRAKKGQAQDYPNGIPECGTDAL
RFALCAMTAGRDLNLDIQRVQGYRFFCNKLWNATKFAMMYFPQDTLYKCHSSPLSPALSP
LDLWMLSRVSLAVQKVNSGFQNYDFPSATTHCYNLWLYDLCDVYLEYLKPVFTQGSPEAQ
TAARQTLYTTLELGLKLLSPFMPFITEELYQRLPREDKSCPSICVADYPTDETTAWRNEE
LEANVETALKIVHLIRSTRSEYNLTNKQRTTVHVLTEMNEVKELFRSLQTLANSELSDDS
PPMGCSILTVSDKIEVHLVLKKENLSQTINKLQQAMTADDYTAKVPADVRKLNSEKLATS
QGEIERLQSAIETLKLM