DPGLEAN00155 in OGS1.0

New model in OGS2.0DPOGS210544 
Genomic Positionscaffold170:- 82651-91342
See gene structure
CDS Length1785
Paired RNAseq reads  272
Single RNAseq reads  682
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA013465 (2e-122)
Best Drosophila hit  CG7708, isoform B (0.0)
Best Human hithigh affinity choline transporter 1 (3e-134)
Best NR hit (blastp)  high-affinity choline transporter [Trichoplusia ni] (0.0)
Best NR hit (blastx)  high-affinity choline transporter [Trichoplusia ni] (0.0)
GeneOntology terms




  
GO:0005298 proline:sodium symporter activity
GO:0008292 acetylcholine biosynthetic process
GO:0016021 integral to membrane
GO:0015220 choline transmembrane transporter activity
GO:0003333 amino acid transmembrane transport
GO:0015171 amino acid transmembrane transporter activity
InterPro families  IPR001734 Sodium/solute symporter
Orthology groupMCL14003

Nucleotide sequence:

ATGATCAACATAGCCGGAGTGATCTCCATCATCCTCTTCTACGTTCTAATTCTGGCCGTG
GGGATATGGGCGGGGCGCAAGAAGCCGCCAGGTAACGACTCCGAAGAAGAAGTGATGCTG
GCAGGACGATCCATTGGATTGTTCGTTGGCATCTTCACTATGACCGCGACGTGGGTGGGT
GGAGGCTACATCAATGGCACCGCTGAAGCCATCTATACTTCGGGGCTGGTGTGGTGTCAG
GCCCCCTTCGGGTACGCGCTGTCACTCGTCTTTGGCGGCATCTTCTTCGCCAATCCGATG
CGTAAACAGGGTTACGTGACCATGTTGGATCCTCTCCAGGACTCGTTCGGCAGTCGTATG
GGAGGACTGTTGTTCCTGCCCGCGCTCTGTGGGGAGGTGTTCTGGGCTGCTGGAATCCTT
GCAGCACTTGGCGCCACGCTGGCCGTCATCATAGACATGGACCACCGCACGTCCGTCATC
TTCAGCGCCTGCGTCGCCGTCTTCTACACCCTGTTCGGAGGCCTGTACTCCGTCGCCTAC
ACTGACGTCATCCAGCTGTTCTGTATCTTCATCGGCCTCTGGATGTGCATTCCTTTTGCC
TGGGCCAACGAACACGTCAAACCTCTCAGCTCTATGGAAGTGGACTGGATAGGAAAGATC
GATCCGGAGTATTACTGGTTCTATGTGGATTACGGGCTATTGCTCATTTTTGGAGGTATC
CCGTGGCAGGTATACTTTCAGCGTGTTCTTAGCAGCAAGACCGCCGGCCGAGCTCAAGTG
CTGTCGTATGTGGCAGCTATAGGTTGTATCTTCATGGCCATACCGCCCGTACTTATTGGA
GCCATCGCTAAAGGCACCGCTTGGAACGAGACGGAGTATCACGGACCTTTGACGGCCGAT
GGTGAGTTGACTTCGGAACAAACGTCGATGATCCTGCCGCTCGTGCTGCAACACCTCACT
CCAGACTTCGTGTCATTCTTCGGTCTGGGTGCTGTCTCAGCTGCGGTGATGTCGTCAGCT
GACTCCAGCGTGCTCAGCGCTTCCTCTATGTTTGCGAGAAACGTGTACAAGCTGATATTC
CGTCAAAACGCTTCTGAGATGGAGATCATTTGGGTGATGCGTGTGTCTATCCTGGTGGTG
GGAGTCCTCTCCACCATCATGGCTCTCACCATCCCCTCTATATATGGCTTGTGGTCGATG
TGCTCGGACCTGGTGTATGTCATCCTGTTTCCTCAACTGCTGATGGTGGTGCACTTCAAG
CATCACTGTAACACGTACGGCTCGCTGGCGGCCTATATTGTTGCTTTAATGGTGCGACTC
TCCGGTGGTGAGAAGCTGCTGGGCCTGCCCGCTCTCATCCACTACCCCGGGTGGGACGCC
ACCAACGAGGTTCAGTTGTTCCCCTTCAGGACGCTGGCCATGGTGCTGTCACTCTTCACA
CTGGCTTTCATCTCGTGGCTATCCGTGTTCTTGTTCAACTCCGGTTACTTGAGTCCTGAA
TCCGATTACTTTAACTGCGTCGTGAACATCCCCGAGGATATTAGAAGAGTGGACGAGCCC
TCCGAGGCTGGGGAGCAGATGTCGGTCCTGGGAGGAGTTCCCGGTAGGCTATATGGAGCT
GCTTCCACTCTCGTGGGTCCGGATGAGAAGTCGGGAAGGATCAACCCGGCCCTGGAACCC
GACGATGACGATCTGGACGACCCCAATGATGGCCCCACGCCGCTCTTCGGATCCAGCAGT
GCACCTCCACCGGTCCAGCCGTTCGGAAAACAGACAGCTTTCTGA

Protein sequence:

MINIAGVISIILFYVLILAVGIWAGRKKPPGNDSEEEVMLAGRSIGLFVGIFTMTATWVG
GGYINGTAEAIYTSGLVWCQAPFGYALSLVFGGIFFANPMRKQGYVTMLDPLQDSFGSRM
GGLLFLPALCGEVFWAAGILAALGATLAVIIDMDHRTSVIFSACVAVFYTLFGGLYSVAY
TDVIQLFCIFIGLWMCIPFAWANEHVKPLSSMEVDWIGKIDPEYYWFYVDYGLLLIFGGI
PWQVYFQRVLSSKTAGRAQVLSYVAAIGCIFMAIPPVLIGAIAKGTAWNETEYHGPLTAD
GELTSEQTSMILPLVLQHLTPDFVSFFGLGAVSAAVMSSADSSVLSASSMFARNVYKLIF
RQNASEMEIIWVMRVSILVVGVLSTIMALTIPSIYGLWSMCSDLVYVILFPQLLMVVHFK
HHCNTYGSLAAYIVALMVRLSGGEKLLGLPALIHYPGWDATNEVQLFPFRTLAMVLSLFT
LAFISWLSVFLFNSGYLSPESDYFNCVVNIPEDIRRVDEPSEAGEQMSVLGGVPGRLYGA
ASTLVGPDEKSGRINPALEPDDDDLDDPNDGPTPLFGSSSAPPPVQPFGKQTAF