New model in OGS2.0 | DPOGS208050  |
---|---|
Genomic Position | scaffold1051:- 20814-24600 |
See gene structure | |
CDS Length | 2934 |
Paired RNAseq reads   | 1139 |
Single RNAseq reads   | 2774 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001478 (8e-35) |
Best Drosophila hit   | Smg5, isoform B (4e-26) |
Best Human hit | protein SMG5 (5e-32) |
Best NR hit (blastp)   | protein SMG5, putative [Pediculus humanus corporis] (2e-100) |
Best NR hit (blastx)   | PREDICTED: similar to Est1p-like protein B [Tribolium castaneum] (8e-97) |
GeneOntology terms    | GO:0005575 cellular_component GO:0003674 molecular_function GO:0009790 embryo development |
InterPro families   | IPR019458 Telomerase activating protein Est1 |
Orthology group | MCL13700 |
Nucleotide sequence:
ATGAAGAACGGGTGTGATGATTTGGATGCTATAATATTGGGGCGTAGTGAACGCGCTAAA
AAGGTTTACAGGTATGTAAACGAAGTAGCGCGACGTCTTGGTGAGGCGACGGCAAACTGT
AAATCTATAACAGAACTTTTTACCACAAAGATTGAATTGGAACGTCAAAAACTAAGAGAC
AACTGTGAGAAATTATTTTTTCTTGATCCAATTAACTATGGCAAAAAAAGCCTTGAACTT
CTGTGGCGAAAAGTCTATTATGACACGGTAAGTGTTGCCAAGAAACTGCGAGAGAATGAT
AATGGGTGTGACAGTTACTTATTCATGCACCTAGTGGGTGGAATTGGCCACTTCAACCAT
CTGATGACCAGAGTACATTCAGAAATGAATGTTCAAGTCAAAGAACTTGATTATTTGCCT
CTTTATGATGAAGATGATTCCGACCCTACCAACACTACCAGGGATTCAACAGACGAGCAG
GGATATCTTGGCAGATTTGTGTTGTATTCATGTCTGATTTATCTCGGTGATCTAAGTCGA
TACCAAGTTGAGATATTCAATACATTTGACAGCACATTAGCTGCGAGATACTATCTTCAA
GCAGCACAACTTGATTTCACTGTGGGCATGCCTTTTAATCAACTTGGAAATCTTTACTTG
GACAAAAATTATAATCTAGATTCAGTTTCATACTACATACACTGTCTGAACACTCTTACA
CCATTTGAGGGTGCGATGGGCAATTTGACAAAAATTTTTGACAAGAATAATCAATTCTGT
GAGACGTTGGTCAACACCAAAGTATTGACCCAGCCGGAACACATGCAAGTGACAATTGCG
AATTTTTTATCCTTGATTGAGATATGGTACCTTGGTAAAGAAAATGTAGATATATCACAA
ATATGTAACACTATAGCTCTTCAACTAAAGATTGCTATGGACTTTACCAAAATGCCTCTG
CCAGATCCAAACCAGAACTATACTGAGTACGTCCAAGCTATGGAAGAAGAAAATATCAAT
CCATCTTATTTAAATTCTAGTGTAATTCATAATATTGTCCAAATTTGTTTGTTTACAATA
GCAAAACTAAATGATACAGATGAAGTCAAAGCATTTCCGTGTAAAGCATTTACATTGGCA
TTTTTATCTCAAGTACTTCAGAAACTACTGAAGCAAATAGAATCTTTTGGTTTAAAAAAT
CCAGCTCATAAGTATGTGTCGAAGTTTGCATCGAAATATAACAAAGAGAAGGAAGCGGAA
GTTACGACTTTAGAAGCGGAAAGTGTAGTGAATGGTGAGAAGAATGAAGAAAACACAGAA
AATTTGACTGCAATTGAGGAACATAGCCCAAAAGAAACTTGTCCAGAAACTGAGGTGCCT
TTGGTAAACAACGGTGACACTAAAAACAGTAAGAAGGCCTTAGCAAAACGACGTCGCCGA
CGGCGCGTTGCATCATCCGAGAGTTCAGACGTTAGTGACGCGGAAACTGAGAGCAGTCTG
ATAGGTTCAGACAAATCTGACTCAGAAGACGACCTGTCAGATTCTACTTTCCAATCAGAC
GATGAGTCTAAAAGCGAAGGATCAGATTATGATGGTTCTGATTGCGAAATTAATGAGGTA
AACCCTAACGCTAACGATGAAAACATGACCAATGGTGATATAAACAAGATCGACAAGAAG
ATCGTCGAAGAGGCAAATAATAACAAAAACAATAAGGAACCCGTAAAAACAGAGAACTCA
AAAAATGATTTCATTGACATACAAGCCATTGAACGATTCCTATTTGGTGATAATTTTCTA
CCAAGCATAAAATTGTTGTTAGATTGGATTCTAACCGAAAAGGAGCTTATATTATCTTGT
GGTGACAGCGGCGAATCGCTCTTCCAGTGCGTAGTAGACCTTCTCAACATATTCACTTAC
TATTTCAATTCAAAGAACTGCGACGTTCCAGCAAATTGTAAGATTCTTGAATACTCTAAG
AATATCGCAAAGAAATTAAAACTTGAATTCAAAACATTACCGCTACCAGAGGACATGAAA
CTTCGGGGAACTAATATTTGCAGATTCGACAAAGATGCAGCTGAATGGCAGATATTAGAT
AAAATGAAACCAACTCTTGTAGAAGAAAACGTTATAAGAATATTAACATTCATCGATTTT
GGATATCAGATCGCTAAAATCGTTCCCAGGATTAGATTCAATAGAACATTGAAAATATTC
TATTTCAAGAAAGTTCTGCCTCCAAAGGTGTCCACGAAAGTTAATCATAAGAAGAGCAGG
GAATGGCACAATTCAAAGAAACAGTCTGATAGCGACATCCTACGTCGTCTGGGTCGTCTG
TGGCTGGCGTCACAGGTCCGTGAACTGGAGCGTACGGGTCAGGAAGTGCCCTCACTGCTG
GCCGTGGACTCGGCGACACTACACAAACACCTGCGTAGAGTGAAGCAGCTTGTACGAACT
AGGAACTTCATATTCCTAGTACCAACTGTGGTTTTACAAGAGCTCGATGATCTAAAACGC
GAGCGCAGTTCAGCTCGGGACGCGATCCGTTGGCTGGAAATACAACTTAAGAGCGGATCA
AGATTCCTCAGGACACAGCGACCAGGACAGTCGAAACCAATTCCTCTACTGAAGTACCCT
CCAAAAGCGCCGCCGCATGTGCACAATTTCATACAAATATTGGAGTTTTGTAATCACTTT
ATATCAGATGAGAAACACGCTCTTGGTGGAAATGGTGATCCAGATAACTCCATACACGGG
AAAAGTGCGCCGATACTTATCTTATTGGTCGGCAACGAACCAGGCAGCGAGGAACAATAT
AAAGACTTCAGTCCAACAGGCACGGCTCAAGCGGCGGGAATATCTGTCAAGTTCATCGGT
GACTTTTACGCAAAATGGCGGCAAACCTTCCATAAGAACGGGAAAAAAAGATGA
Protein sequence:
MKNGCDDLDAIILGRSERAKKVYRYVNEVARRLGEATANCKSITELFTTKIELERQKLRD
NCEKLFFLDPINYGKKSLELLWRKVYYDTVSVAKKLRENDNGCDSYLFMHLVGGIGHFNH
LMTRVHSEMNVQVKELDYLPLYDEDDSDPTNTTRDSTDEQGYLGRFVLYSCLIYLGDLSR
YQVEIFNTFDSTLAARYYLQAAQLDFTVGMPFNQLGNLYLDKNYNLDSVSYYIHCLNTLT
PFEGAMGNLTKIFDKNNQFCETLVNTKVLTQPEHMQVTIANFLSLIEIWYLGKENVDISQ
ICNTIALQLKIAMDFTKMPLPDPNQNYTEYVQAMEEENINPSYLNSSVIHNIVQICLFTI
AKLNDTDEVKAFPCKAFTLAFLSQVLQKLLKQIESFGLKNPAHKYVSKFASKYNKEKEAE
VTTLEAESVVNGEKNEENTENLTAIEEHSPKETCPETEVPLVNNGDTKNSKKALAKRRRR
RRVASSESSDVSDAETESSLIGSDKSDSEDDLSDSTFQSDDESKSEGSDYDGSDCEINEV
NPNANDENMTNGDINKIDKKIVEEANNNKNNKEPVKTENSKNDFIDIQAIERFLFGDNFL
PSIKLLLDWILTEKELILSCGDSGESLFQCVVDLLNIFTYYFNSKNCDVPANCKILEYSK
NIAKKLKLEFKTLPLPEDMKLRGTNICRFDKDAAEWQILDKMKPTLVEENVIRILTFIDF
GYQIAKIVPRIRFNRTLKIFYFKKVLPPKVSTKVNHKKSREWHNSKKQSDSDILRRLGRL
WLASQVRELERTGQEVPSLLAVDSATLHKHLRRVKQLVRTRNFIFLVPTVVLQELDDLKR
ERSSARDAIRWLEIQLKSGSRFLRTQRPGQSKPIPLLKYPPKAPPHVHNFIQILEFCNHF
ISDEKHALGGNGDPDNSIHGKSAPILILLVGNEPGSEEQYKDFSPTGTAQAAGISVKFIG
DFYAKWRQTFHKNGKKR