| New model in OGS2.0 | DPOGS208052 |
|---|---|
| Genomic Position | scaffold1051:- 2891-11012 |
| See gene structure | |
| CDS Length | 1467 |
| Paired RNAseq reads | 294 |
| Single RNAseq reads | 771 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001479 (1e-75) |
| Best Drosophila hit | CG42404 (1e-20) |
| Best Human hit | integral membrane protein DGCR2/IDD isoform 3 precursor (1e-07) |
| Best NR hit (blastp) | CG42404 [Drosophila melanogaster] (7e-34) |
| Best NR hit (blastx) | PREDICTED: similar to type II collagen, putative [Nasonia vitripennis] (2e-26) |
| GeneOntology terms | GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process |
| InterPro families | ND |
| Orthology group | MCL18284 |
Nucleotide sequence:
ATGGCTCAAGGCGAGTGTATAGACTTCCGTGGCAGACATATATCAAACGGTTTGCATTAT
GTGCCCGGCCCCGATACATGTACGCTTTGCATCTGTGAAAATGGTTTGCCTAAAGTGTGT
AAGGCTGTCTTGTGTTCACCCCCACAAGATTGCCGATCATTCCGTTTGGGCAATACTTGC
TGTGAGTTCATTTGTCTTGATGATGTAGTGAAACCCACTGATGGGGCGGAGGCGAATATC
AGGGTTGCGGCATCAGGAGCTGCTTCAGTGGTCCTGTTAACTATAGCCCTTGTTGTATAT
AGAGTGAGGAAACAAAAACGACGTAGGCCTCTGCATGCCGAAGACCAAAGAAGTTTGACT
AGTATTGGATATATTAGTGGCAGTATGGGGTACATGGGAGGTACTTGTGAAACAGCTCAA
CTGGGTGCCTGGAAGCCTCCTTCGAACTATCTTCCTAGAGGAGAAGCACCACCACCATAT
GAAGAGGCTATGGCACAATGCAGATCTGATCCTATGAGAGTAACAAACGAAACATCTTTC
CACCGTTCATACCCTTTGGAGCCTCGAGATGAAGTGTGCGCGACCCACGCCTATGTCAAT
CTACCACGACCACTCGTGCAGAATTGCTACAACGCTCCACTCCTACAACCAGTACACCCG
CCTGAAGCCAGGGAGGCGATCGTCATGCCGCATCCATTGGTAGCTAATATGGGGGTTGGG
GGTCGCCTGACGGGGTCGCTGGGGGCTATCAGCGCCCGCCTCAGCGTACCCCGCGATGAC
CACGAACGTGACAGAGTCGAACGTGTCGAACGACCCCACAATGTCCCCGGCTTCTACACC
ACACACACGGCATTACACCGCACTATACCACGTATATCGACAGCCCTGGACACGTCCACA
CTAGAAGCGATGGGTTTCAGTCGAGCGGACCGGTCCCTGGCGGGGGAGGTGAGGAGATCC
TTCCACAGACCAGACGCCAGGGAGAGAGACAGACCTCACACCGGGAGGAGCGTGCCCAGG
AACCTGAACATCGCGTCCGCCTCGCCCGCACACGAACAGGAAGACGATCTCGCTGTGCGG
CCCCGTCTCCACAGTGTCCACAACGATGAAGACAAAAAGGAGTTGACACCACACAACCAC
CCGACACTACCTCTTACTGTGGACAAACCATCCTGCGAGTGTAGCTACGAGGCAGCTCGC
GACGCTGACGATTATCGCAGCGAGTGTGAGAACTGTCACTCAACCAACAACTCGGGTTGG
GAGGAGGGCGGTAGTGAGTGGTGCGGCGGAGGAACACAGACGCTGCAGAGACGAGCGCCG
CCGCCGCCCGCACAGCCCGCCGCCACCGCTACACTGCCGCAGCCGGTCACTAAGGGACAG
GGCCGTAACGGAATGGGCAACCCTTCGAACTGGGAGAACTGGTTCAATACGATCCCAGAC
TCCGACAGCGAGTCAGAAGAGGAATGA
Protein sequence:
MAQGECIDFRGRHISNGLHYVPGPDTCTLCICENGLPKVCKAVLCSPPQDCRSFRLGNTC
CEFICLDDVVKPTDGAEANIRVAASGAASVVLLTIALVVYRVRKQKRRRPLHAEDQRSLT
SIGYISGSMGYMGGTCETAQLGAWKPPSNYLPRGEAPPPYEEAMAQCRSDPMRVTNETSF
HRSYPLEPRDEVCATHAYVNLPRPLVQNCYNAPLLQPVHPPEAREAIVMPHPLVANMGVG
GRLTGSLGAISARLSVPRDDHERDRVERVERPHNVPGFYTTHTALHRTIPRISTALDTST
LEAMGFSRADRSLAGEVRRSFHRPDARERDRPHTGRSVPRNLNIASASPAHEQEDDLAVR
PRLHSVHNDEDKKELTPHNHPTLPLTVDKPSCECSYEAARDADDYRSECENCHSTNNSGW
EEGGSEWCGGGTQTLQRRAPPPPAQPAATATLPQPVTKGQGRNGMGNPSNWENWFNTIPD
SDSESEEE