| New model in OGS2.0 | DPOGS208023 |
|---|---|
| Genomic Position | scaffold1051:+ 35310-41000 |
| See gene structure | |
| CDS Length | 2055 |
| Paired RNAseq reads | 797 |
| Single RNAseq reads | 2019 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001475 (2e-144) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | PREDICTED: hypothetical protein [Nasonia vitripennis] (2e-21) |
| Best NR hit (blastx) | PREDICTED: hypothetical protein [Nasonia vitripennis] (2e-11) |
| GeneOntology terms | ND |
| InterPro families | IPR000504 RNA recognition motif domain IPR006553 Leucine-rich repeat, cysteine-containing subtype IPR022364 F-box domain, Skp2-like IPR012677 Nucleotide-binding, alpha-beta plait IPR001810 F-box domain, cyclin-like |
| Orthology group | MCL18370 |
Nucleotide sequence:
ATGTATTTCGACGTCGACGATGATGATGGATTATTCAACCGCGAAGTATATCACGTTGTT
CATCAGGAACTTTATGCAATAAATTCTAATCTCGATCTAACAGCCTTTGGTGTAAGAAAT
GTTCCGACTCACACTGAAGATGGAATACCCATCAGAAAACTATATGTTTCCAATTTGCCA
CCGAAGACAACTCGAACAGAGCTCTTTGGAGTGTTTGCTCAGTATGGGTTTATCAAGAGC
TGTTGGTTAAGAATGGGGGATAAAGGACCAAACACGACTCCGACTCCTACATATGCATTT
GTCACATTTAGTAATGCTGCAGATGCCCACAAAGCGTTACGAGCACCTGTTCATGAGAAG
ACATTAAGAGGCAGAAATCTCAGAATATCCCCGGCCGATAGTTGGCACCAACCTGCTGAA
GATGTGGATGGGAGAGTACTCTGGAAACCAAACCGCAGGGAAGACAGCACACTATGGAAC
AGTGATCAGCTAAACGGAACAGCTGAAACATCAGAACAGGTCGAAGATAACGAAGCTAAT
AATGAAGGGGATAATGTTGAGGAGGATGATATATGCAATGCATACAATATATTGGATATT
CTGAATAGAGATTGCTTGACGCACATCCTAACATATGTTCCTATTAGAGATCTTATACAA
TCCGAAAGGGTCAGCAAGAGATGGCAGGCCATGGTACAAGAATATTTACAGGGTGTTCGT
ATGTTCAAGACGTCGTGGTGGCAGCACGTGCCGGTGACGTTAACTACGGCTGTTCTGCGT
CGCGTGCTGGCCAGATTGGGCGGGGCCCTCCTCAGGCTTCACATCGACCACCACTGGTCC
GCGCTGAACGACCGCACCGCTCACACCGTTGGGAAATTCTGTCCGCACCTTGAGGAGCTT
AAGGTCGTTGGAATGCATACGAAAAATTGGAATCCTCTTATCTATGGGTGTAAACAGTTA
AAGAGCCTGTCCTTCGTTTCGTGTAATAAGCTGACGGATTCCAGTCTGGTGCACCTGGTG
AAGAACGACTCGTGTATAGAGAGTTTGACGGTGGCCAATAACACTCACGTCACGGGGCTG
TTCTTGACCGGTTCGAATCCATCCAGGCTGTCGTCGCTGTCCTTCTACAACTGCTACAGC
CTCCAGGGAACCGTCCTCAGTGCGGCGATAGACACGCTGCCCAGCTTGACGACGTTGAAA
CTGGATGTATGTCCGGTGACGATGTGGAAAATCATACCGTTAATACTGAGCAAGCTGCCC
AAACTGGAAGAATTATCTCTCAGCGAGTACACCTCGGTGGAACTGTGCCTCGCCCCGTTA
GGGGTGGACGCGTTCTGTAAAGCGATGTCCGGACTGACGGAACTGAAGGTGTTGAATCTG
AGCAGAAATATTTATATAACTAACGCTGTCCTCAAAACGGTGGCGCAGTCCTGTCCCAAG
CTGGAGTCCTTGAATATATCCGGTTGTAACTCCAGGAAGAGCTTTCCCCATCCAGGTGTC
GGAGACGAAGGTCTGATAGCGATTGGCTCCTGTTCGTCTCTGAGTCGCCTGGACGTGTCG
TATCTAGCGACGCTGACGGACTCGGGGCTGTCAACCGTGGCCTTGCTACCTCGTCTCACT
ACACTCATATCACGCGGGAACTACGCGCTCTCCGCGGCACCCTTTGTCGCAGCCCTGGCC
GCCTGCCCTGCTTTACAGGAGATAGATGCTTGCGGCTGCGACGGTGTGTCGGAGGAGGTG
GTGTGTGCGGCCGTCGCTGCTCTCACGCAAAGACCGAGGCCGCTGATACTGAGACTGGCC
GCCACCGGCGCCGCACTCGCCGACGCCGACAGACAGCATGAGTTGGAGAGTCACAGGTTG
CTGACGGTGAACCTGTACGAGGACCGCAGCAACCCTCACCTGAGAGCTGACTTCGTGGAT
CGCATCTTCGAGGAAAGTCCCGACGGCTCCTTCGACCTGTACGACCCCGACGACTTCGAC
GACCTGCTCGGTGAAGATGACGACATCTTTTTGGACGACGGATTCGAGTTGAGGCCCAAC
ATTTTGTTCCTTTAA
Protein sequence:
MYFDVDDDDGLFNREVYHVVHQELYAINSNLDLTAFGVRNVPTHTEDGIPIRKLYVSNLP
PKTTRTELFGVFAQYGFIKSCWLRMGDKGPNTTPTPTYAFVTFSNAADAHKALRAPVHEK
TLRGRNLRISPADSWHQPAEDVDGRVLWKPNRREDSTLWNSDQLNGTAETSEQVEDNEAN
NEGDNVEEDDICNAYNILDILNRDCLTHILTYVPIRDLIQSERVSKRWQAMVQEYLQGVR
MFKTSWWQHVPVTLTTAVLRRVLARLGGALLRLHIDHHWSALNDRTAHTVGKFCPHLEEL
KVVGMHTKNWNPLIYGCKQLKSLSFVSCNKLTDSSLVHLVKNDSCIESLTVANNTHVTGL
FLTGSNPSRLSSLSFYNCYSLQGTVLSAAIDTLPSLTTLKLDVCPVTMWKIIPLILSKLP
KLEELSLSEYTSVELCLAPLGVDAFCKAMSGLTELKVLNLSRNIYITNAVLKTVAQSCPK
LESLNISGCNSRKSFPHPGVGDEGLIAIGSCSSLSRLDVSYLATLTDSGLSTVALLPRLT
TLISRGNYALSAAPFVAALAACPALQEIDACGCDGVSEEVVCAAVAALTQRPRPLILRLA
ATGAALADADRQHELESHRLLTVNLYEDRSNPHLRADFVDRIFEESPDGSFDLYDPDDFD
DLLGEDDDIFLDDGFELRPNILFL