| New model in OGS2.0 | DPOGS202335 |
|---|---|
| Genomic Position | scaffold926:+ 2514-51589 |
| See gene structure | |
| CDS Length | 3183 |
| Paired RNAseq reads | 499 |
| Single RNAseq reads | 1362 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005001 (2e-15) |
| Best Drosophila hit | CG16779 (1e-46) |
| Best Human hit | zinc finger protein 541 (7e-28) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC014528 [Tribolium castaneum] (1e-135) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC014528 [Tribolium castaneum] (7e-80) |
| GeneOntology terms | GO:0005622 intracellular GO:0003677 DNA binding GO:0008270 zinc ion binding |
| InterPro families | IPR015880 Zinc finger, C2H2-like IPR001005 SANT domain, DNA binding IPR009057 Homeodomain-like IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR000949 ELM2 domain IPR007087 Zinc finger, C2H2-type IPR017884 SANT, eukarya |
| Orthology group | MCL12778 |
Nucleotide sequence:
ATGTATAGCGCGGCGGTGGGCGGAGAAGGTGTCGCGCTGCAGCTCCGAGAGGCGACACCT
TCAGAAATAGATGAACGGCTCTCCATAGCCTGTCACGAGCCTGAGTTACTGGCTGACCTG
CTTCACGCTGCTGACATAGACGGTGAGCATGCAGGTCTCACGGAACTTCTTGGTGCATCG
TCTCCAGATCTGGCTTTTTCTTCTGACGCATCAGATAGCCTGCCACTACCAGAACACGAT
AATGAATGCACGACATCATCATCGTCAAGTGTGAGCGGTGTCACGAGGGTGTCTGTAGCG
GTGACCGGAATAGAGTCAAAGACCTTGGCCAAAAAGGTCCGACCTAAACCAGCGTCTCCG
AACCGCCAGGGGCCGCAGCAATGTCAAGTTTGCAACAAAGTGTTCGGCAACGCGTCTGCA
CTAGCGAAGCATAAGCTGACGCATAGCGATGAGAGGAAATATGTCTGCATCACTTGCGCA
AAAGCTTTTAAAAGGCAAGACCATCTGAACGGGCACATGCTTACGCACCGCAACAAGAAA
CCATACGAGTGTAAGGCGGATGGGTGCGGAAAATCGTATTGCGACGCTCGGTCTCTTCGA
CGTCATACTGAAAATCATCACCAGCCTCCCTCTGATAAGAGCACCTCATCAGAATCGAGT
GTGGATCGGGAGACGGCGCGAGTGACGTCACCCTCTTCGCCCTCTCGCACTAACTCTGCG
ACTTCTAATATGAACAGCTCGGAGAAATCTCGCAATGACAGCAGCCCGCCGCACACACCG
CCGCCGAGAGCACGCAACAAACCGAAGGCTAAAACTACGCAACAGAGCAGCCCGAAATGC
GGTGGCAGCAGTGTGAGCCGTTCAAGTGCGACTGGCAGTTCTGGACTGATTCGAACAACA
GATGTCAAGCCCGTCGAGTGTAATTTATGTCACCGCAGATTTAAAAACATCCCCGCCCTC
AATGGCCACATGCGACTACACGGTGGATACTTCAAAAAGGATTCAGACAACAAGAAGTTA
GACAAGAAAGAATCAACTGGTCCTCCTTTACAAACTGCCTCTGTATCCGTGAGAGCTCTG
ATCGAAGAGAAGATCATAAGTCGTCGAGGTGCTACCGTATCACAAGCACCAACCTCAGGT
ACAACAACCGACACAATATCTCGATCGGGGTTTATTGTTCCAGCCCCACCACCTCTATCA
ACTATTAAAACTTATTCGTCACCAGTAACAACGGTTACTACTTCAGCACCATTTGTTTCC
CCCCGTGCACCGCCAGCAGTGACAGTATCAAATACAACTACATTAAATAGAGATTCTACG
CTCATTGAACTTTTAAGAAAAGGAAGCTCAAAGGTTGTTAAGCGCTCCGCATCTGATCCT
GGCCAGGCGTCACCACAGCAACAAGACTTTACTTTCCGACCTGAATTATTTGGCGTATCG
TTTAACTCAGACGATGGTTATTTTTCACCTGCTTTAAATGACGATACTTTCCAATTTGCA
ACAGCTTCTGATCATTTAGAAGAACTTGCGTCTCTTGAAGACTACGCAACTGTTGCTGCC
TCTATACGAGAGCGGTCACCCGTAACTTTCCCGTCCAGTCGTCGTTTAGCTGCAGTTCTA
AATTCTCCCCTACCAGAATCTTTAGCTGATTTTGGAGCTTGTCATGGAGGATCACCTGTT
CCATCTCCTGGTATCGCATATGCTGATAGTTCACCGGGATTGTCTTATACAACTGGGGAT
TCACCAGGGTTAGCTTACACAGCCACATCTCCTAGTGGTAGTTATTCCAATCAACCGGAA
CCTTCACCAAGTTTCGCTTATCCAACACCTCCAGCATCTCACGATGCCCATTCACCGGCC
CATACAGTCCCAAGAGCATCGTCGCCACTATCAGCTGCATTTTTTACGGCTACAATGTCC
AGTCAAGAAGAGGTGGAAGAGGCCCTTGAAGAGGTTTTGCCTGAAGAATGCCGATCTTTA
GATGCTTATGCTTTGGAATCTTCAACAACTACAAGACGAATTATGCTTAATTCCGAAGAT
CCCCTTTTGTCCAGTAGTCCTCGGGATTTCCCCAATCAAAGAAGTATTCGTCGCCAGAAT
AGAGTAGCAACACCTATGGCAGCACCTATGCAAACATGGCAACAGGACACAACAGCGCTT
CAAGTGTGTGTGGAAGGTCGAGACCCACTACCAGCAGTATTTCTTAGTCCGAACAGCGTA
CCGGCGTCGCCTCAACAACGCAAACGTCGCGCGTCTCCAGCTGGTCCATACAAGTCGCGC
ATGCGTCGTAGAGTCAATCACTACACACCACAACCAACCCTACCACCAGATAGAGACGGT
TGCGGTCTATTCGTAGAAATCAGAAATGCCCTTCAAGCCAACCTTGATATTACACTTGAA
GATACACCACTGGAAGAGAATCGCTTACCACAAATTAATATCGGATCCGATCATCAAGCA
GATATACCGGAACTGTGTAACGACCGTATAGATCTACATAGAGCTCCGGAACAACTCTTA
TGGGATCCTGGTATTAACGACGCACTAGATGACAATGAAGTCCGCATGTTCATGGAGCTG
GCGATGTGTGCGGCGATGCCAGTTGGAGGACATACAAGAGAGAGTGCTTTACAAACATTG
GGAGAGTGCGGTGGTGACGTCCGCATTGCGACGCTTCGTCTCATGTCTCGACCAGCTGCG
CCCTCACAACAGGAGTCACGCTGGACTCCTGACGAAGTGGAGGCTTTCCTAGCTGGACTT
GGGCAGTTCGATAAAGATTTCTTTAGGATTTCACAACTGGTAAGATCGAAGGACTCAAAA
CAGTGCGTTCAGTTTTATTACTTCTGGAAGAAGGTGACAAAAGACTACAAGACACTGTAT
TTAAGAAGTTGGGCCGATTCTCAAGCTCAAGGTTCCGTAGCACAGATTTCGTCTCGAACG
ACCTCATGCGCCTCGCCAACAACAGCGTACGAAGGCGAGGAGTTTCCGTGCAAAATATGC
GGAAAAGTATTTAACAAAGTTAAAAGTCGTAGCGCACACATGAAGTCGCACCGGCCACTC
GACGCCGAGCCCAAACGGTCAAAACTCGAAAAACCTTATGAAAAGGTCGAGAGATCTGAC
GAGAGGTCGATCAGATCTGAGCGACAGCAAAACACAAAAGCAAACAGCTCAGTAACTGAC
TGA
Protein sequence:
MYSAAVGGEGVALQLREATPSEIDERLSIACHEPELLADLLHAADIDGEHAGLTELLGAS
SPDLAFSSDASDSLPLPEHDNECTTSSSSSVSGVTRVSVAVTGIESKTLAKKVRPKPASP
NRQGPQQCQVCNKVFGNASALAKHKLTHSDERKYVCITCAKAFKRQDHLNGHMLTHRNKK
PYECKADGCGKSYCDARSLRRHTENHHQPPSDKSTSSESSVDRETARVTSPSSPSRTNSA
TSNMNSSEKSRNDSSPPHTPPPRARNKPKAKTTQQSSPKCGGSSVSRSSATGSSGLIRTT
DVKPVECNLCHRRFKNIPALNGHMRLHGGYFKKDSDNKKLDKKESTGPPLQTASVSVRAL
IEEKIISRRGATVSQAPTSGTTTDTISRSGFIVPAPPPLSTIKTYSSPVTTVTTSAPFVS
PRAPPAVTVSNTTTLNRDSTLIELLRKGSSKVVKRSASDPGQASPQQQDFTFRPELFGVS
FNSDDGYFSPALNDDTFQFATASDHLEELASLEDYATVAASIRERSPVTFPSSRRLAAVL
NSPLPESLADFGACHGGSPVPSPGIAYADSSPGLSYTTGDSPGLAYTATSPSGSYSNQPE
PSPSFAYPTPPASHDAHSPAHTVPRASSPLSAAFFTATMSSQEEVEEALEEVLPEECRSL
DAYALESSTTTRRIMLNSEDPLLSSSPRDFPNQRSIRRQNRVATPMAAPMQTWQQDTTAL
QVCVEGRDPLPAVFLSPNSVPASPQQRKRRASPAGPYKSRMRRRVNHYTPQPTLPPDRDG
CGLFVEIRNALQANLDITLEDTPLEENRLPQINIGSDHQADIPELCNDRIDLHRAPEQLL
WDPGINDALDDNEVRMFMELAMCAAMPVGGHTRESALQTLGECGGDVRIATLRLMSRPAA
PSQQESRWTPDEVEAFLAGLGQFDKDFFRISQLVRSKDSKQCVQFYYFWKKVTKDYKTLY
LRSWADSQAQGSVAQISSRTTSCASPTTAYEGEEFPCKICGKVFNKVKSRSAHMKSHRPL
DAEPKRSKLEKPYEKVERSDERSIRSERQQNTKANSSVTD