New model in OGS2.0 | DPOGS208608  |
---|---|
Genomic Position | scaffold6203:- 1162-4936 |
See gene structure | |
CDS Length | 960 |
Paired RNAseq reads   | 215 |
Single RNAseq reads   | 645 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013423 (1e-138) |
Best Drosophila hit   | RhoGAPp190, isoform A (2e-53) |
Best Human hit | rho GTPase-activating protein 5 isoform b (2e-23) |
Best NR hit (blastp)   | PREDICTED: similar to AGAP000870-PA [Tribolium castaneum] (5e-80) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC004583 [Tribolium castaneum] (1e-78) |
GeneOntology terms    | GO:0005100 Rho GTPase activator activity GO:0016319 mushroom body development GO:0007165 signal transduction GO:0005622 intracellular GO:0050770 regulation of axonogenesis |
InterPro families   | ND |
Orthology group | ND |
Nucleotide sequence:
ATGTTACTCATAGTAAATATTGGTTATCAGGTGGCGAATTACTCGGAGGCTTTGCGGATA
AGAAGGGAGACTCTCGATTTTGTCACGGAGGCTTTCACTCAGCTGATAAGAATACACGTA
CAGGATCACAAAGAGATGTGGTCGGCGGTTAGCAAAAGATTGTGTCACTATCCAGAATGG
ATCAAGTTTGTACAACAGTTCGGAAATGACGGAACCCAGGTGGTTTTTCGACGTCACATC
CGTCGCCTGAAGGAGGAACGTTCAGCTAAGAAGCTCAGGAAGCAACTGGCCAAGTTACCA
CAGGTTCTTACTAGGATGCAGTTGTCTACTGATGACATGCAAGAAAGTGACTGGGGTTCC
GTGGTCCGTCAGATACGTTCTCATCGTCACTTCTCTGTGTACTTCACGGAGACACGGCCC
AGGGGGAGCTCGGACAGCGGCTCGGACGAGCCCCCGCATGACGCCACGCTCAGGGTTGGT
GATAGGGCGAAGTATCAGACTCTGGGTCAATCTCAGAAGATACCCTTCGAGATTTTGGAA
ACGAATGAAGCGGCAGCTATTTTCAAAACATACTTACACGAAGCTCAAGAGAAACAACGG
AACTTTGAATGGTGTCAGCAATTTAAGCGACTGTTAGAAGAAACGGGTTACGTAACACCC
GGGAAACAGCTGTCGGAAGTAAGGGTGCTGTTGATGGGCAGGGAGTGCTATGAGGCTCTC
ACCGAGGAGCAACAGCAGAGAGTGTACGACGATCATCAGAGAGAGATACAGAGGAGAGCC
AAACATAACCTACAGGAACTGCTATTGGAGCACGCGGATCTCTTCTACCACTTCAAGCGG
ATATCACCAACGGGAACCATAACCCAGGAGGATATTAAGGAGATCACTGATGTGCTGCAA
GACGACTTCCGGTGGGTAGACTTATATTATATTACATACAAATTAGAGCTGACAGAATAG
Protein sequence:
MLLIVNIGYQVANYSEALRIRRETLDFVTEAFTQLIRIHVQDHKEMWSAVSKRLCHYPEW
IKFVQQFGNDGTQVVFRRHIRRLKEERSAKKLRKQLAKLPQVLTRMQLSTDDMQESDWGS
VVRQIRSHRHFSVYFTETRPRGSSDSGSDEPPHDATLRVGDRAKYQTLGQSQKIPFEILE
TNEAAAIFKTYLHEAQEKQRNFEWCQQFKRLLEETGYVTPGKQLSEVRVLLMGRECYEAL
TEEQQQRVYDDHQREIQRRAKHNLQELLLEHADLFYHFKRISPTGTITQEDIKEITDVLQ
DDFRWVDLYYITYKLELTE