| New model in OGS2.0 | DPOGS202102 |
|---|---|
| Genomic Position | scaffold2256:+ 19652-24092 |
| See gene structure | |
| CDS Length | 1638 |
| Paired RNAseq reads | 4307 |
| Single RNAseq reads | 10049 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009139 (5e-86) |
| Best Drosophila hit | 26-29kD-proteinase (6e-83) |
| Best Human hit | cathepsin H preproprotein (1e-53) |
| Best NR hit (blastp) | putative C1A cysteine protease precursor [Spodoptera frugiperda] (1e-156) |
| Best NR hit (blastx) | putative C1A cysteine protease precursor [Spodoptera frugiperda] (8e-151) |
| GeneOntology terms | GO:0004197 cysteine-type endopeptidase activity GO:0006508 proteolysis GO:0005811 lipid particle GO:0005875 microtubule associated complex |
| InterPro families | IPR013201 Proteinase inhibitor I29, cathepsin propeptide IPR000668 Peptidase C1A, papain C-terminal IPR000169 Peptidase, cysteine peptidase active site IPR013128 Peptidase C1A, papain |
| Orthology group | ND |
Nucleotide sequence:
ATGATTGCCTTTATATTAAAAATTTTTCCGTTACTCATTGTTGCATCGGTTGCTGGGAAA
AATGTTCTTGAAGATGACCTTCCAAAACTGAAATGGCCCAAAAAGTATTCGTTCGAAGCC
GAATCTCTGTCACTGACGTCAGGTTTGGTTCAAGATGTCACCTACTGGCGAGTCAGCAAA
AAATCGAGGGTAGATTTTAACAAAGGTGCCGTAAAACTGATATCAATTAAGGGCCAGAGG
AAGTCAAAATTTCCTTTCGGTGTAAAATATGAGATTCATCCCGAAAGTAATGAAGAATAT
GAGAACAAATTCATCTGCACGGGAATGAAAGGAAACATCTTCAGACAAGCCAAACTGGAT
AAGGTTTTGCCAGATGTTGACGATTTTGTCCACATTGGGAAGGAGAAACTTGAATTAGGT
GAGGTGGAAAAGTTTACATTCTTTGAAGACAAAGATTATATTAACTCTCAAACGAGGCAG
AATTTATGGGTGTTACAAAATGATTCAACATTTATACCCGTTAGATATGAGAAGATAATA
TATAATACTTGGATTAAAAATGTGAAAGATCACACAATTTGGAACATCTTCAACTTCAAA
ACCGATTTCAGCGAAGACGTCTTCGACACAGATGACTATGATTGCAAAATTAATTCGCCC
AAAAATAACAATGAAAATGAAGAGGTTGATAGTGATGAAAGCACAAACTTGGATTCGGAT
CACGTATTCGCAGAATTTATGCAAAAGCACAATAAAAACTACGACGGTCCTGAACATGAG
CAGCGCAGAAAAATTTTTGAAACTAATTTAAGAAAGATTGAGGAACATAATAGAAGTAAT
AAAAACTTCAAGCTAGCAATAAACAAGTTTGCTGATCTTACCCACAAAGAAATGGAAAAA
CGGAAGGGTCTCAAACGACGAGGCAAATCATCAGGCGCAATTCCATTTCCGTATAGCAAA
TCGAAGATCGCTGAAATGTCTGATACTCTACCGAAAGAATATGACGCGAGGATGTACGGC
CTAGTAACATCGGTTAAGGATCAACAGGATTGTGGATCGTGTTGGACTTTTGGAACAACT
AGCGCGGTAGAGGGAGCTCTAGCAAGAATAAATGGTGGAAGACTTATGAGACTCGCCAAC
CAAGCTCTTATAGACTGTGCCTGGGGATATGAGAATTTTGGCTGTGACGGGGGTACAGAC
ACGGGAGCGTATCACTGGATGTTGAATTATGGCATGCCCACTGAAGAGGAGTATGGTCCA
TATGTGAACAAAGACGGTTTCTGTAGAATACACAATATGACGCAAACCTACAAGATAAAA
GGATTTACTAACGTTACACCCTACAGCGTTGAAGCTCTTAAGGTGGCCTTGGTGAACCAC
GGTCCGTTGTCGGTGTCCATCGACGCTACAGACATGCTTACTTATTACAACGGCGGTATC
TACTCCGATAGTGACTGCAGTACTACAAATTTAAACCATGAAGTAACTCTCGTCGGCTAC
GGTGAATTGGACGGTGAAGAGTATTGGATAGTGAAAAATTCTTGGGGTAGGGATTGGGGT
GTTGACGGCTATTTCCATATCACAACCCGGGATAACAGCTGCGGGATCACCACTGAACCT
ACTTATGTAGTTTTCTAA
Protein sequence:
MIAFILKIFPLLIVASVAGKNVLEDDLPKLKWPKKYSFEAESLSLTSGLVQDVTYWRVSK
KSRVDFNKGAVKLISIKGQRKSKFPFGVKYEIHPESNEEYENKFICTGMKGNIFRQAKLD
KVLPDVDDFVHIGKEKLELGEVEKFTFFEDKDYINSQTRQNLWVLQNDSTFIPVRYEKII
YNTWIKNVKDHTIWNIFNFKTDFSEDVFDTDDYDCKINSPKNNNENEEVDSDESTNLDSD
HVFAEFMQKHNKNYDGPEHEQRRKIFETNLRKIEEHNRSNKNFKLAINKFADLTHKEMEK
RKGLKRRGKSSGAIPFPYSKSKIAEMSDTLPKEYDARMYGLVTSVKDQQDCGSCWTFGTT
SAVEGALARINGGRLMRLANQALIDCAWGYENFGCDGGTDTGAYHWMLNYGMPTEEEYGP
YVNKDGFCRIHNMTQTYKIKGFTNVTPYSVEALKVALVNHGPLSVSIDATDMLTYYNGGI
YSDSDCSTTNLNHEVTLVGYGELDGEEYWIVKNSWGRDWGVDGYFHITTRDNSCGITTEP
TYVVF