New model in OGS2.0 | DPOGS213471  |
---|---|
Genomic Position | scaffold3047:+ 9873-16558 |
See gene structure | |
CDS Length | 1896 |
Paired RNAseq reads   | 566 |
Single RNAseq reads   | 1253 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004496 (4e-73) |
Best Drosophila hit   | DNA polymerase interacting tpr containing protein of 47kD (2e-77) |
Best Human hit | tetratricopeptide repeat protein 4 (4e-51) |
Best NR hit (blastp)   | Cyclophilin seven suppressor, putative [Pediculus humanus corporis] (5e-88) |
Best NR hit (blastx)   | Cyclophilin seven suppressor, putative [Pediculus humanus corporis] (2e-88) |
GeneOntology terms    | GO:0005634 nucleus GO:0005488 binding |
InterPro families    | IPR019734 Tetratricopeptide repeat IPR023114 Elongated TPR repeat-containing domain IPR011990 Tetratricopeptide-like helical IPR001440 Tetratricopeptide TPR-1 IPR013026 Tetratricopeptide repeat-containing |
Orthology group | MCL13297 |
Nucleotide sequence:
ATGACTGAGGAGGAAAGGATCGCGCTGTGTCAAAAATTGGACAAAGAACTTAATGATTTT
ATAGATGGCTTGGAGAAAAAGCGATATACTGAGGGATGGCCAGAAGACCGGTGGGAGGAG
GAAATGGATAAACATCCGTTCTTCATGAAGTCTACTCCTGAGGACGGTGAGCTCTCCCCG
TTAGCCGAGGGACTGGCCAAACTGAAATATGATCCTGAGGAAAATACCCCATTGGAACTG
GCCACCAATTACAAAGAGGATGGAAATTTCAACTTCAAACACAAGAACTATCGACTTGCT
ATTATAGGGTACACAGAGGGTATCAAGGTAAGGTGTGATAATGCGGAAATAAACGCCAGC
CTATACAATAATAGGGCTGCAGCACACTTCCATCTCAAGAACTACAGGTCAGCTTTGTAT
GACAGCGAGAAAGCATTGTCATTCAACCCAGGACACGAGAAATCGAGACTAAGAGCCGCA
AAATCGGCACTGCAGATATCGAGATTTGATACGTGCATCGAACATTGTCAGCAACTTCTA
GAACAAAAATCATCAGATAAAGAACTCTCTGAGCTAATGGCTGATGCCAAAAAGAAAAAG
ATGGTGGTGGCGCGAGATGAAAGAAAGAAGAAGAAGGTGGAAGCCAAGAGAAGCGAACAG
AAGGATTTAGTCGTGAAAGCTGTAATCCAGCGCGGCATTAAAATATCCAAATGCGAAGAT
GAAGATGACATAGATCTATCAAAGTTAGAACCAACTTTGCCGGGGGCTCAGGAGTCTATA
GTACATTTAGAGAATGGCATTTTAAAATGGCCGGTGCTATTCCTGTATCCGGAATATCAG
ACGTCCGATTTCGTGAAAGCCTGCCCAGAGGATGTGCCACTGATTCGCCAATTGGAGCAA
CTATTTCCAGCGCCTTGGGACGAGGCTAAAACTTACAACGTTAGAAGCATTAACGTCTAT
TACGAGGGTAGCGACAAAATGCCTCACGTGGTTGATCCGAAAAAGAATTTAGGTGAACTG
TTAGTTGCTAAATATTATGAATTGAAGGCCGGCACTCCCGCGTTTTTCGTTATGGTACGC
GGCAGTCGGGCGGAAAGCAGATTTATAGAATGTTATCTGTACCAAGAAGATGTCCAGGTA
ACAAGTAGAAAAGCAGAAAAGTATGCTTGCTTGTACAGCAATAGGGCTGCAGAGCATTGG
AATCTCAGAAACTTCAAACAAGCACTGTATGACAGTGAGAAAGCCTTGCTACTAAACCCC
GAAGACGACGAAACAAGACTAAGAGCTGCAAAATCAGCATTGGAAGCAGCTAAATATGAC
GCTTCTATTGAACATTGTCGGAAACTAATACAGAAAAATTGCACAGATATAGAACTCTTT
GAGCTTTTGGCTATTGCTAAAATGAGGAAAAAGGAGGCTAAGACGGATGAATCGTCAGAA
TTAATCGTGAAGGCTGTACTTGAGCGCGGCATTAAAATATCTAAATGTAAAAATAAAAAT
GACATAGATATATCAAAATTAGAACCAACTTTACCGGGGGCTCGCGATTCTATGGTATAT
TTAGAGAATGGCGTTTTAAAATGGCCGATTCTATTTCTATATCCGGAATATGAAACCTCA
GATTTCTTGACAGGCTGCCCAGAGAATGTGCCACTGATTTATCAATTGGAAAAACTGTTC
CCGGCGCCTTGGGATAGGGGTAATAAATACTGCAGTGCCAATATTAAGGTTTATTACGAG
GGTTGTGATAAAATGCCGCATATTGTGGACCCCAGGAGGAGCTTGGGTGAACTCTTAGTA
TCTACATATTATGAATTGAAAGCCGGCACCCCGATGTTTTTTGTCATGGTACGCGGCAGT
TGGGTGGAGAGTATGTTTTTAGACTGTTACCTGTAA
Protein sequence:
MTEEERIALCQKLDKELNDFIDGLEKKRYTEGWPEDRWEEEMDKHPFFMKSTPEDGELSP
LAEGLAKLKYDPEENTPLELATNYKEDGNFNFKHKNYRLAIIGYTEGIKVRCDNAEINAS
LYNNRAAAHFHLKNYRSALYDSEKALSFNPGHEKSRLRAAKSALQISRFDTCIEHCQQLL
EQKSSDKELSELMADAKKKKMVVARDERKKKKVEAKRSEQKDLVVKAVIQRGIKISKCED
EDDIDLSKLEPTLPGAQESIVHLENGILKWPVLFLYPEYQTSDFVKACPEDVPLIRQLEQ
LFPAPWDEAKTYNVRSINVYYEGSDKMPHVVDPKKNLGELLVAKYYELKAGTPAFFVMVR
GSRAESRFIECYLYQEDVQVTSRKAEKYACLYSNRAAEHWNLRNFKQALYDSEKALLLNP
EDDETRLRAAKSALEAAKYDASIEHCRKLIQKNCTDIELFELLAIAKMRKKEAKTDESSE
LIVKAVLERGIKISKCKNKNDIDISKLEPTLPGARDSMVYLENGVLKWPILFLYPEYETS
DFLTGCPENVPLIYQLEKLFPAPWDRGNKYCSANIKVYYEGCDKMPHIVDPRRSLGELLV
STYYELKAGTPMFFVMVRGSWVESMFLDCYL