| New model in OGS2.0 | DPOGS214446 |
|---|---|
| Genomic Position | scaffold882:+ 3458-6593 |
| See gene structure | |
| CDS Length | 1287 |
| Paired RNAseq reads | 120 |
| Single RNAseq reads | 329 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009612 (2e-75) |
| Best Drosophila hit | Prolyl-tRNA synthetase (8e-82) |
| Best Human hit | probable prolyl-tRNA synthetase, mitochondrial precursor (5e-82) |
| Best NR hit (blastp) | PREDICTED: similar to prolyl-tRNA synthetase [Tribolium castaneum] (2e-101) |
| Best NR hit (blastx) | PREDICTED: similar to prolyl-tRNA synthetase [Tribolium castaneum] (3e-90) |
| GeneOntology terms | GO:0005737 cytoplasm GO:0016874 ligase activity GO:0005524 ATP binding GO:0005759 mitochondrial matrix GO:0000166 nucleotide binding GO:0004827 proline-tRNA ligase activity GO:0005739 mitochondrion GO:0006433 prolyl-tRNA aminoacylation |
| InterPro families | IPR002316 Prolyl-tRNA synthetase, class IIa IPR004154 Anticodon-binding IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain IPR006195 Aminoacyl-tRNA synthetase, class II |
| Orthology group | MCL12931 |
Nucleotide sequence:
ATGAAATTATTATCTAAAATATTCCAACCTGTGATCACAATACCTAAGGGTGCGAAGATA
AAGAACACGGAAATAACATGTAAAAGTCAGAAACTCTTGTTAGAATGCGGTCTGGTCCGT
CCAACGAGCACCGGTTTCTTCACCCTGCTACCGTTGGCAAGACGAGCTCTCACCAAATTA
GAAAACATTGTACACCGCTGCTTAGAAGACGTCGGTGCTCAACAGATATCACTACCTTGT
CTCACTTCCAGCAGGCTATGGGAAGCGAGCGGACGTTTAGACAGAGTTGGCTCCGAGTTG
TTAAAAGTAGAAGATAGACACAACAAGAAGTATATATTAAGTCCGACTCACGAGGAGGCC
ATCGCCGACTTGTTGTCCGATGTAGCTCCGTTGTCACACAAACAGTTACCGTTCATACTG
TACCAGATTGGTAACAAGTATCGTGACGAGCTCCGTCCTAAGCACGGTCTGCTGAGGTCG
AGGGAGTTCCTCATGATGGACGCCTACAGTGTACACACGGACACGGACAGCGCGCTCTGT
ACATACGACACACTCACACACGCGTACAGGAACGTGTTCAGAGAACTGCGGCTGCCGGTG
AGGAGAGTGGAGGCTCCGTCGGGTGACATGGGAGGCACTCTCTCCCACGAGTGGCAGCTG
CCAGCTCCCTCTGGCGAGGACTGTCTGTCTGTGTGTCCGTCTTGCTCACACACCACCTTA
CTGGAGGAGGGGAAGGAGGGCAGAAAATGTGTCGCGTGTGGCAGAGAGACGGAGATATGT
AGCAGTATTGAGGTTGGTCACACGTTCGTCCTCGGTGACAGGTACAGCGCCCCCATCGTG
ATGGCCTGCTATGGTATAGGACTCACGAGGCTGCTTGCCGCTAGTGTGGAGCTCCTCTCA
TCCGAGCGTTCCCTGAGGTGGCCGCACGCTCTGGCGCCCTACAAGGCCATAGTTATAGGA
CCTAAGGAAGGTTCTAAGGAGTGGGTACATCATGACAGTCCTCGGTTGGAGCAGCTCGGG
GCTCAGGTGGAGGCTGTAGCTGGTGACGTGGTTTTGGACGACAGACATCACCTCACCATA
GGGAAGAGATTGCTTCAGGCTGATAAAACTGGCTATCCATACATCATAGTGTGCGGGCGC
TCCGCCCTGGAGTCTCCGCCGCGGTATGAACTGCATCGAGACCAAGGCGAAGTCCTAACT
CTGCCGCTAAACGAACTATTAGCATTCATTAAAGATGATAACAAAGAACGAGATTTAAAG
TTTAAAAGAGAAAGCGAATATATATAA
Protein sequence:
MKLLSKIFQPVITIPKGAKIKNTEITCKSQKLLLECGLVRPTSTGFFTLLPLARRALTKL
ENIVHRCLEDVGAQQISLPCLTSSRLWEASGRLDRVGSELLKVEDRHNKKYILSPTHEEA
IADLLSDVAPLSHKQLPFILYQIGNKYRDELRPKHGLLRSREFLMMDAYSVHTDTDSALC
TYDTLTHAYRNVFRELRLPVRRVEAPSGDMGGTLSHEWQLPAPSGEDCLSVCPSCSHTTL
LEEGKEGRKCVACGRETEICSSIEVGHTFVLGDRYSAPIVMACYGIGLTRLLAASVELLS
SERSLRWPHALAPYKAIVIGPKEGSKEWVHHDSPRLEQLGAQVEAVAGDVVLDDRHHLTI
GKRLLQADKTGYPYIIVCGRSALESPPRYELHRDQGEVLTLPLNELLAFIKDDNKERDLK
FKRESEYI