New model in OGS2.0 | DPOGS214447  |
---|---|
Genomic Position | scaffold882:+ 8281-16252 |
See gene structure | |
CDS Length | 822 |
Paired RNAseq reads   | 5127 |
Single RNAseq reads   | 13343 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009614 (7e-82) |
Best Drosophila hit   | CG9796 (3e-28) |
Best Human hit | gamma-interferon-inducible lysosomal thiol reductase preproprotein (3e-20) |
Best NR hit (blastp)   | lysosomal thiol reductase IP30 isoform 2 [Bombyx mori] (4e-83) |
Best NR hit (blastx)   | lysosomal thiol reductase IP30 isoform 2 [Bombyx mori] (5e-82) |
GeneOntology terms    | GO:0019886 antigen processing and presentation of exogenous peptide antigen via MHC class II GO:0005764 lysosome GO:0048147 negative regulation of fibroblast proliferation GO:0050821 protein stabilization |
InterPro families   | IPR004911 Gamma interferon inducible lysosomal thiol reductase GILT |
Orthology group | MCL11184 |
Nucleotide sequence:
ATGGACGCAAAAAAGCTAAACTTATTAGTCGTAGAGATAGAATTTGAGTATGAACTCGCT
GCTCGCTGCTCACAGACACAGCGTCACTCGCTCTCCGTGTCGTGGGTCGTGCGTCGGCGG
CCGTTCGCGCGATTAAGTTTAAAAAAAAGTGTACACCGAAGTCATTGTTTGTGCAGAATC
TTTGTTTTTTTGATCATGCGATCTCTGCTTGTTTTATTTGTGCTGACCGTCCTTTGTGGA
GTTCACGCGAAGGGAAAACATGACGACAAGGTGAAGATAGCTGTGTACTACGAGTCACTA
TGCCCGGACAGTAAGAAGTTCATAACGAGCCAGCTGGCCCCGGTCTGGAGAGACTTCCGG
GGACAGGTCAAGGTCAAGATGGTGCCCTACGGGAAGGCCACCCACGACAAAGTGAACGGT
AAATGGCAGTTCATTTGTCACCACGGACCCGACGAGTGTTACGGTAACAAGCTCCAGTCA
TGTATCCTGAAAGACCGCACGCTCCAGGACACCGACAAGATGGAACTCATCATCTGTCTC
ATGGGACAGGGGCATCCCGACAAGGCCATCGACACCTGTCTTGGTCAAGTCAAGAGAGAA
GCCGAGTCCGCCAAGTTGAAGAAATGTGCGTCAGGGGCCCAGGGTGACGCGTTGCTGGCG
TCCTACGGTGACAAGACGGACGTCGTGCAGAGACCGCTGTCCTTCGTGCCGACTGTTGTT
ATCAACGAGAAATTCGACCAAGCCGTCCAGGACGAGGCCGTGAGCGACCTGAAGGCGGTG
GTGTGTCGCGTGGCCGCCAACAAACCAGCTCTCTGTCTTTAA
Protein sequence:
MDAKKLNLLVVEIEFEYELAARCSQTQRHSLSVSWVVRRRPFARLSLKKSVHRSHCLCRI
FVFLIMRSLLVLFVLTVLCGVHAKGKHDDKVKIAVYYESLCPDSKKFITSQLAPVWRDFR
GQVKVKMVPYGKATHDKVNGKWQFICHHGPDECYGNKLQSCILKDRTLQDTDKMELIICL
MGQGHPDKAIDTCLGQVKREAESAKLKKCASGAQGDALLASYGDKTDVVQRPLSFVPTVV
INEKFDQAVQDEAVSDLKAVVCRVAANKPALCL