| New model in OGS2.0 | DPOGS213845 |
|---|---|
| Genomic Position | scaffold1357:- 15137-17586 |
| See gene structure | |
| CDS Length | 1650 |
| Paired RNAseq reads | 0 |
| Single RNAseq reads | 1 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013788 (0.0) |
| Best Drosophila hit | CG9518 (2e-118) |
| Best Human hit | choline dehydrogenase, mitochondrial precursor (7e-66) |
| Best NR hit (blastp) | PREDICTED: similar to CG9517-PB, isoform B [Apis mellifera] (1e-157) |
| Best NR hit (blastx) | PREDICTED: similar to alcohol dehydrogenase [Acyrthosiphon pisum] (3e-154) |
| GeneOntology terms | GO:0008812 choline dehydrogenase activity GO:0006066 alcohol metabolic process GO:0050660 FAD binding |
| InterPro families | IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal IPR012132 Glucose-methanol-choline oxidoreductase |
| Orthology group | MCL16728 |
Nucleotide sequence:
ATGGCAAACAGACTTTCCGAAGTTAAAAAATGGCGGATACTATTATTAGAAGCTGGTCCT
GAAGAACCAGATGTTTCAATGATTCCTGGAATTGTGAGAACGTTAGCAGGTTCGTCAATA
GATTGGAATTACAGAACGCAGCCGGAACCATTAACCTGTAGATCCATAAGGGGAAAAACT
TGTGCTTGGACTAGCGGAAAAACTATGGGTGGTTCAAGTTCAGTTAACTATTTAGTTTAC
ATGAGAGGAAATAGGCGTGATTATGATCACTGGGCTGAATTAGGTAACCCTGGATGGAGC
TATAAAGACCTATTGCCTTATTTTAAGAAGTCTGAAAACAATAGAGAAATTGAAGGTCGA
GATCCATATTATCATGGAACAGGAGGGCCAATTACTGTAGAAAGATTTTCGTATTTAGAC
AGCAGCACGGTTATGCTAGTGAGAGCGTTCAATGAAACCGGTCTTCCAATTATTGATTTA
AATAAAGAAAACAATATCGGTACTGATATAGCCTTATCTACTTCAAGAGATGGTCGAAGA
GTTTCAACAAACGTAGCTTATATTAAACCAATACGCAAAGTGAGACCAAATATTGATATA
ATTGTTAATGCCTTTGTAAAACAGTTAATAATAAATCCTGCTACGAAAACGGTAAGAGGA
GTCATTTACTTGAAAAATGGTATTACTTACAGGGTTTTTGCCAAAAAAGAAGTTATAGTA
AGCAGCGGTGCTTTAAACTCTCCTAAATTGTTGATGTTGTCAGGTATAGGACCAAAAAAA
CATTTGGAAAGTTTAAATATACCAGTTATATCTAATTTATCTGTGGGACATAATTTGCAG
GACCATGTGACTACGCACGGTCTCAGTATTTTATTAAACAATAAAACTTCAACGATGATC
AGTGCAAAGGAATTATTCCAAAAAATACGAAAGTACTATGACGAAGATCCCAAGAAGGGT
GGTCCATTATCAGCCACAAGCATTTTAAATAGTGTAGCATTTATAAAAACCAAATATGCA
AATGAAGATGCCCCCGATATTCAATTTCACTTTGATGGTAGAAATGTTGAAGAGTTCTAT
TCAGATCCTCAAACATATATGGAAACGAATATTCTACCTGTTTCTTTCTACAACGGCCTT
ACAGCTAGACCGCTTCTGCTAATTCCAAAAAGTAGAGGAATTATTTTATTAAATAAAACC
AATCCTGAATATGGGCCACCGTTAATTTATTCACGATTTTTTACAGTACAAGAGGATATA
GACGTTATGATTGAGGGGTTGCGATACGCAATCAGTTTAGAAAAAACTGACGCTTTCAAA
GAAAATGGTGCCCATTTTGTTAGAAAGCCAGTAAAAAACTGTGAATCTTATCTTTGGGGA
TCTTACGAATATTTAAAATGTTTACTGATCGAGTATACTACTACAATTTACCATCCTGTA
GGGACATGTAAAATGGGTCCTCCAACAGATAAAGAAGCAGTTGTTGATAGCAGATTGAGA
GTGTACGGTGTTAAGAGATTACGAGTTGTTGACGCTTCTATTATGCCATTTATTGTAAGA
GGAAATACCAATATACCAACCGTAACAATAGCAGAACGTGCTTCTGATATGATTAAGGAA
GATTACAGTGAGACAGTGGAAATATTATAA
Protein sequence:
MANRLSEVKKWRILLLEAGPEEPDVSMIPGIVRTLAGSSIDWNYRTQPEPLTCRSIRGKT
CAWTSGKTMGGSSSVNYLVYMRGNRRDYDHWAELGNPGWSYKDLLPYFKKSENNREIEGR
DPYYHGTGGPITVERFSYLDSSTVMLVRAFNETGLPIIDLNKENNIGTDIALSTSRDGRR
VSTNVAYIKPIRKVRPNIDIIVNAFVKQLIINPATKTVRGVIYLKNGITYRVFAKKEVIV
SSGALNSPKLLMLSGIGPKKHLESLNIPVISNLSVGHNLQDHVTTHGLSILLNNKTSTMI
SAKELFQKIRKYYDEDPKKGGPLSATSILNSVAFIKTKYANEDAPDIQFHFDGRNVEEFY
SDPQTYMETNILPVSFYNGLTARPLLLIPKSRGIILLNKTNPEYGPPLIYSRFFTVQEDI
DVMIEGLRYAISLEKTDAFKENGAHFVRKPVKNCESYLWGSYEYLKCLLIEYTTTIYHPV
GTCKMGPPTDKEAVVDSRLRVYGVKRLRVVDASIMPFIVRGNTNIPTVTIAERASDMIKE
DYSETVEIL