| New model in OGS2.0 | DPOGS213847 |
|---|---|
| Genomic Position | scaffold1357:+ 23799-28269 |
| See gene structure | |
| CDS Length | 2034 |
| Paired RNAseq reads | 47 |
| Single RNAseq reads | 114 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013788 (2e-07) |
| Best Drosophila hit | CG9518 (1e-123) |
| Best Human hit | choline dehydrogenase, mitochondrial precursor (5e-69) |
| Best NR hit (blastp) | PREDICTED: similar to alcohol dehydrogenase [Acyrthosiphon pisum] (1e-168) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP003782-PA [Tribolium castaneum] (9e-161) |
| GeneOntology terms | GO:0008812 choline dehydrogenase activity GO:0006066 alcohol metabolic process GO:0050660 FAD binding |
| InterPro families | IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal IPR012132 Glucose-methanol-choline oxidoreductase |
| Orthology group | MCL16728 |
Nucleotide sequence:
ATGACTACCACGTGGTCACCACATAATATAGCTCCATTATGCATGGAGCAACAAGCGAAT
TTAACCCAATGTTCGTCTGCCGGGTTCTTATTTCTCTCTTTAGTTGTCAAGTTGTTTGGC
AATGCTACATACAGTACAAGTAATCCAGAACAGTATCCTTCAGAATCTCATTCGTCTTTT
CATGGTTACAATCCATTTGTACAATACCAATCTACATTTTCCTCTGAACGGCATAAATCC
TCATCATCTTCTACGGACCAGTTATTTCAGTACTTTTCTGGTACAAGGGCAGCAACAGAA
ACATTTGGTCCGAGATCACATAGAAGGAAGAAATCTAATGAGTACGACTTTATCATTGTT
GGAGCTGGATCGGCTGGATGTGTCTTAGCAAATCGGCTAACCGAAATAAAGAATTGGAGG
GTACTTTTACTAGAAGCAGGTTCTGAAGAACCAGATGTTACTATGGTGCCCTCATTTCCA
CCGCTGAATAGAGACTCGTCCATTGACTGGGGATACAGGACACAGCCAGAAAAGTTGACA
TGTAGAGGATTTAGTGGGCATCAATGTGTATGGCCAAGGGGTAAAACAATGGGTGGTTCT
AGTGCAATTAACTACATAGTATACATGAGAGGACATAGACTTGATTACGACACATGGGCA
GAGTTAGGAAACCCAGGCTGGAGTTATGATGAGTTACTGCCTTACTTTAGAAAATCAGAG
AATAATCGTGCGATTGAAGCTATTGACACAATTCATCATGGAGTGGGCGGACCTATGACC
GTAGAAAGATTTCCTTACTTAGATGAGAATACTTTTATGCTTGTCGAAGCTTTTAATCAA
ACTGGCTCACCGATTATTGATTTAACTGGAGAAAACAATATCGGTACAAATTTAGCCCTA
TCAACTTCTAGAGATGGAAGACGGATGTCCACAAATATAGCCTATATCAGACCTATACGC
CATATAAGACCAAACCTTAATATTGTGGTGAATGCTTTTGCTACTAAATTAATTATAGAC
CCAGTAACAAAAATTACTTTGGGTGTAACATATGTAAAAAATGGTGTAACTTACAATGTT
TTTGCAAGAAATGAAGTAATAGTAAGTAGTGGTGCTCTTAATTCTCCGAAACTCCTTATG
TTATCTGGGATAGGCCCTAAGGAGCACTTAGAGAGTCTAGATATACCTGTTGTGGTAAAT
TTAGCAGTTGGAAGAAATTTACAAGAACATGTAACTACAGAAGGTCTTACCTTAGCTTTG
TCAAATAAAACTTCAACTATGGTAAGTACTCAGGAACTACTTGATGCGGTGAACGATTAC
TACCAACAAGAACCAAAAAAAAGTGGTCCATTATCATCAACGAGCGTCTTAAGCAGTGTT
GCATTTATTAAAACTAAATATTCTACAGTAAATGCACCTGATATACAATATCATTTCAGT
GCTAGAAATGTTGAGGATTTTTATGCAAATCCAAGAATTTACTTAGAAGCCAATATTTTT
CCATTAGCATTCTACAATGGTTTGTCCGCTAACCCTCTTTTATTAACTCCCAAAAGTCGG
GGAGTTATTTTACTAAATAATACTGATCCTGTATATGGCCAACCTTTGATATATTCGGGA
TTTTATACTGTCAAGGAAGATATGGACGTTATGGTTGAAGGATTGCGTTACGTTGTTAGT
TTAGAAGAAACTGAAGCTTTTCAGCAGAACGGCGCTCGCTTCGTTCGAATTCCCGTCAAA
AACTGCGAGGATCATAAATGGGGTTCTTATGATTATTTTGCTTGTATACTCATTCAGTAT
ACTGCAGTAATCTATCATCCTGTTGGCACTTGTAAGATGGGTCCGGTGTGGGATAAACAG
GCTGTTGTTGACCCAAGATTAAGAGTTTATGGAATAAGCAGATTAAGAGTAGTCGACGCC
TCTATAATGCCATTAACAGTTAGAGGAAATACAAATATACCGACAGTTACTATAGCAGAG
CGTGCAGCTGACATGATTAAAGAGGACTATTCGACGAGAAACAATCACAATTAG
Protein sequence:
MTTTWSPHNIAPLCMEQQANLTQCSSAGFLFLSLVVKLFGNATYSTSNPEQYPSESHSSF
HGYNPFVQYQSTFSSERHKSSSSSTDQLFQYFSGTRAATETFGPRSHRRKKSNEYDFIIV
GAGSAGCVLANRLTEIKNWRVLLLEAGSEEPDVTMVPSFPPLNRDSSIDWGYRTQPEKLT
CRGFSGHQCVWPRGKTMGGSSAINYIVYMRGHRLDYDTWAELGNPGWSYDELLPYFRKSE
NNRAIEAIDTIHHGVGGPMTVERFPYLDENTFMLVEAFNQTGSPIIDLTGENNIGTNLAL
STSRDGRRMSTNIAYIRPIRHIRPNLNIVVNAFATKLIIDPVTKITLGVTYVKNGVTYNV
FARNEVIVSSGALNSPKLLMLSGIGPKEHLESLDIPVVVNLAVGRNLQEHVTTEGLTLAL
SNKTSTMVSTQELLDAVNDYYQQEPKKSGPLSSTSVLSSVAFIKTKYSTVNAPDIQYHFS
ARNVEDFYANPRIYLEANIFPLAFYNGLSANPLLLTPKSRGVILLNNTDPVYGQPLIYSG
FYTVKEDMDVMVEGLRYVVSLEETEAFQQNGARFVRIPVKNCEDHKWGSYDYFACILIQY
TAVIYHPVGTCKMGPVWDKQAVVDPRLRVYGISRLRVVDASIMPLTVRGNTNIPTVTIAE
RAADMIKEDYSTRNNHN