| New model in OGS2.0 | DPOGS215853 |
|---|---|
| Genomic Position | scaffold394:- 19902-43659 |
| See gene structure | |
| CDS Length | 4503 |
| Paired RNAseq reads | 97 |
| Single RNAseq reads | 268 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000401 (0.0) |
| Best Drosophila hit | NMDA receptor 1 (1e-42) |
| Best Human hit | glutamate [NMDA] receptor subunit 3A precursor (5e-74) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC010967 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC010967 [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0045471 response to ethanol GO:0051721 protein phosphatase 2A binding GO:0005515 protein binding GO:0005234 extracellular-glutamate-gated ion channel activity GO:0042165 neurotransmitter binding GO:0043025 neuronal cell body GO:0045202 synapse GO:0042802 identical protein binding GO:0004972 N-methyl-D-aspartate selective glutamate receptor activity GO:0005216 ion channel activity GO:0060134 prepulse inhibition GO:0016021 integral to membrane GO:0030288 outer membrane-bounded periplasmic space GO:0005215 transporter activity GO:0016358 dendrite development GO:0016020 membrane GO:0006811 ion transport GO:0035235 ionotropic glutamate receptor signaling pathway GO:0014069 postsynaptic density GO:0043005 neuron projection GO:0016594 glycine binding GO:0004872 receptor activity GO:0030054 cell junction GO:0005262 calcium channel activity GO:0048511 rhythmic process GO:0045211 postsynaptic membrane GO:0006816 calcium ion transport GO:0017146 N-methyl-D-aspartate selective glutamate receptor complex GO:0005886 plasma membrane |
| InterPro families | IPR001638 Extracellular solute-binding protein, family 3 IPR001320 Ionotropic glutamate receptor IPR019594 Glutamate receptor, L-glutamate/glycine-binding IPR001828 Extracellular ligand-binding receptor |
| Orthology group | MCL15148 |
Nucleotide sequence:
ATGCGCGCGCGCACGCTGCTGCTCGCGCTGGCTGTGGCGCTGGCGGCAACAGCGCGAGAG
TTGCGTGTACTACAGGACGCACGGACCTCGTTCTATCTGGCGATCGCCGCACCGTCTTCA
GCCTCCGACTTTGTGCGCACCTTCAATCGTACTCTCAGCGATCTATCCCAAACCTATCTC
GCCGGGGATTATCCCCTCTATTTACGCAATATCACGCTGTTACCGCTGTACATCGAGCTG
CCAGAAGATGAAAGGTTCAGTGCGCGGGTATTGGAAGAGACGTGTGCAGCACTGGAGGGG
CGGAGGGTTGCAGCGCTTCTTGTTTGTGGTGGAGGCTCTGCTGCTGCTGCGCTGGTTTCA
ACAGCCTCCCGCGCAGGTGTTCCAGTTATCCGCGCATCACCATCTCACTTGCGGTTCGCC
TATACCATCGCTAATGAACTGCTGCCTTTGGAGGTTCGACTGGAGATAACAGCAAGAGAA
ACATTACATGCACTCAGAGCCACTCTACTGCACACCCATTGGCATACCTTTACTTTGCTT
GCTGAAGAAAACATATATTTAACGCTATCGCTAAGGAAGGATCTCTCTTCAATCCTTACA
ACTCAACCGCTTAATCCTAAATGGCTCTCGCTTCCTTCGAATTATACACGCCGTGCCATC
TTTAGGCGACTTGCCGAAGTCTCGAGACTGACACGGGGTGTGGTTGTTCTAATTTGCGAT
ATTAATTATGCGAAGCTTATTATGGACGAAGCCAAACGCTTAAATATGCTTGATGGCCAT
TTTTTCTGGTTATGGATCGACGCTTCTAATGAAATTGATGTTTTCCATAATATCGGAAAT
CGTACTAAATATGCAGAGGAAAATTTCAAGGAGAGCTTGAAAGACAAAGACGAAGCATTT
ACATTTGATGATTTTGAGCGTATCAAACGAGATCACGCAGACAATAATTCATTAGAAGCA
AATAGTCCTAAAATTACGAGAAAAAATAATAGATTTTCAAATAAAAGTAGTATTATGGGA
AGTAGACATGTAAGAAATATTTCAAAGAATTCAATTTATCGTCGTGTTAGTAGAAATACA
AATAAAATTGAAACGCACATGAATAGTAAATTATTATATACAAATTTTAGTCATTCGTAT
AATGGTAGTCGCAATATTAGTGAAAGTGTAAGGACTTATAATATAAAGAAAAAAGGCGTT
GAAACTTCTAAAATTGAAAAGAACTCAATTGAGAGGGAAAATTTGTCCTTGCTCGATATA
AATAAGGGTAAACAGACTAGTTCTAATGAATTGAATAGTGAATCTTTTAACAAATATGTA
AATAGTATAAATATAAACAAAGTTTATAATAAAAATGAAGTATTAGAAGAGAATACTGTA
AGTAGTATTGATAGTCAAGAACTAAGAGATAGAATATTATTTTCAAGTGATATTAGTGAT
TTCATTATGAATCCCACGGTGCAAACTCCTACGAGTAATATAAGAGGTGCAATCGAGAAA
CGAAATAATCGATTTGCGATGGACCACGAGGAGCCAATTAGTAGAGACGAAAGTGATATT
AAAAAAGTATTTAATAGTCTCCCAGTTGGGTTACTAGCATTACATCCGCAGTCTATGAGA
ATAGATAGCTCCTTTGCAAAGGCTGCTGTCAGAATGATGGTTGGAGCACTCAGGCGTGTA
CTTGGCGCATGCGACGCGTGGTCTGCTCAAGCACAATTTTTTAGCGACGCAGCAGCATCT
TGTTGGGATGAACCCAGTGATGCTGCATCAGACTTTTCCATGGAGTTTGTGAGAGAAATA
AGAATCTCTGCAACTGCAGCATTAGCAGGCGGATTTGAACGCCCAGAGCCGTCTTTATTA
GCTGAGTTCGCTTTTTTAAATTTAGTATCAAACCCCAATGGTGGTAATAAGTGGAGACAA
GTTGGCCATATCCTTGGTCGCAGTGTAAGACTTCATACAATAGTGTGGCCAGGAGGTCGT
CTAGTTGCTCATGGCCAATCATCAGGTGCTCGCACTATTTTCCGCATAGTTACAGCTCTA
GCTCCGCCCTTTGTTATGGAAGGTGAATTAGATGAAGATGGTCAATGTCTACGTGGACTT
CCGTGTCATCGTCCACAAACGTCTGATCGAGATAATCTTACACTTGTTTTTAATGAATTA
GAAAGAGACAGCGATCAAACAACAACAGATTTTTTTTTCCCAACACCTAAACCGTCAACT
ATTTGGAAAATGGCCACTCATTGTTGCTATGGATTTGCAATGGATTTGTTAGAAAATATC
GCAGAAGAATTAGAATTTGATTTTCATTTATATATTGTAGATGATGGTCTATATGGATCT
CGAAAATTAGTAAAACCATTTCGTAATTTCAATGAAGATAAAAATAATGATAAAAAACAC
AGATCAAGTGACCAGTCGCAGGCCAAGCATCGAGACGACGACTTTATTGATATAGATAAA
AATGAGTATAATAAACAAAATAGCTTGACAGGAGACGGGGATTCCGATGACAATTCTGAT
ATATGGAAATGGAATGGTATTATTGGAGATTTGGTGTCTGGAGCTGCACACATGTCATTT
GCTGCCCTTAGCGTGTCGGCTGCTAGGGCAGAAGTAGTTGACTTCAGCCAACCTTATTTT
TTTAGCGGAATATCTATTTTAGCAGCACCAAACCAAAGACCAGACATACCACTTTTAGCA
TTTTTGTTGCCGTTTTCTCCAGAATTGTGGATTGCAATATTCACCTCACTTAATGTTACA
GCTATTGCTGTAGCAATATACGAATGGCTTTCTCCATTTGGATTAAATCCGTGGGGTAGG
CAAAGATCAAAAAACTTTAGTATTTCAAGTGCACTGTGGGTAATGTGGGGACTTCTTTGT
GGACACTTAGTTGCTTTCAAAGCCCCAAAAAGCTGGCCTAATAAATTCCTAATCAATGTT
TGGGGTGGCTTTTCTGTGATATTTGTCGCAAGTTACACTGCTAATATAGCAGCTCTGATA
GCTGGTTTATTTTTTCATAATGCTGTTGATGACTACCAAGGAAGAGGCAATTGGTTGTCT
TTACGAGTCGGCACAGCAAAATCTTCAGTAGCTGAATATTATATTCAACGAAATAATCCA
CTGTGGGCGCAACAAATGCGTCGTTTTGCCCTTCATAATATAGAGGAAGGAATTGAGCGG
CTGAGGAATGGAAGTTTGGACCTTTTGATAGCCGACTCACCTGTTTTAGACTATTATCGC
GCCACAGATCATGGCTGTAAGCTTCAACGCGTAGGAGACCATGCTCTCACTAAAGATATT
TATGCAATAGGAATGTCAAAAGGATTTCCTCTAAAGGACAGCATATCGGCTGTAATAGCC
AAATATTCATCAAACGGTTACATGGACATTTTAACTGAGAAATGGTACGGTGCTCTACCT
TGCTTCAAACTAAGTCCTGATTATGGAATACAGCCAAAACCACTCGGCGTTGCGGCTGTT
GCGGGTGTATTTATATTACTGGGAGTAGGAATGATTGTAGGATGCCTAATATTGATTTTG
GAGCATCTTTTTTACAAATACACGCTTCCTATTTTACGCCATCAACCGAAAGGAACTATT
TGGAGGAGTCGAAATATAATGTTTTTCAGTCAGAAACTGTACAGATTTATAAATTGCGTC
GAACTTGTATCACCACATCACGCAGCGAGGGAGCTCGTTAATACTATTCGGCAGGGTCAT
TTCACATCTTTATTCCAAAAAAGTGTAAAAAGGAAGGAACACGAACAGCGTAGAAGAAGA
AAAAGCAAGGCACAGTTCTTTGAAATGATCCAAGAAATCAGAAGGGTCCAACAAGGTCGT
GATCTTTCATTGGATTCCATTAAAGAAAATGCTGTTGTGGAAACTTCAGAATTGTCGGAA
GATGTAACCGAGACAAAATTTCTTTCACCGTCACCCGACGTATCAAGTCATTCACCGCGT
CGAAGCAGGTCACCAAGACAATATAGATCTCCAAGAAGCAAAAGAAAAAGGTGCAGTTTA
GCGGGTCTTAATGTACGTAGATTTAGCACTGATTCGGTCTTAGGGTCCGATTCTGCTTCA
ATATATGAAAAAACTAGTATTAATATTGGTCGAAGATTAAGTCGTGACGTTAGTTTCCTA
ACCAATTCCCCGCCGGATATTAATACAAGACTACGAACACCATCGCCGATGGTTAGGCGA
CCCGAAGGATCCTCTACAAGATCTTATCAAGACATGTCTGATTCTTCTCCTAATTATTTA
GCCATAGACGCTCCAAGTCATCGAGCGAGTGTGGAAATAATGGTTACTCAGGAATCGGAA
ATTTCATCTGCACCGCCTTATAACCGAGTGTCTCCAATGGGTGCAAGATCTGAATTATCT
CGATTGTCTGAAGAAGAACTGATTAGATTATGGCGAAGTTCTGAACGTGAAGTTAGAGAG
GCTCTTTTGGCTGCATTACAAGAGAGGAGAGCGAGTCTGGAGCCAAAACAAGAACCAGGA
TGA
Protein sequence:
MRARTLLLALAVALAATARELRVLQDARTSFYLAIAAPSSASDFVRTFNRTLSDLSQTYL
AGDYPLYLRNITLLPLYIELPEDERFSARVLEETCAALEGRRVAALLVCGGGSAAAALVS
TASRAGVPVIRASPSHLRFAYTIANELLPLEVRLEITARETLHALRATLLHTHWHTFTLL
AEENIYLTLSLRKDLSSILTTQPLNPKWLSLPSNYTRRAIFRRLAEVSRLTRGVVVLICD
INYAKLIMDEAKRLNMLDGHFFWLWIDASNEIDVFHNIGNRTKYAEENFKESLKDKDEAF
TFDDFERIKRDHADNNSLEANSPKITRKNNRFSNKSSIMGSRHVRNISKNSIYRRVSRNT
NKIETHMNSKLLYTNFSHSYNGSRNISESVRTYNIKKKGVETSKIEKNSIERENLSLLDI
NKGKQTSSNELNSESFNKYVNSININKVYNKNEVLEENTVSSIDSQELRDRILFSSDISD
FIMNPTVQTPTSNIRGAIEKRNNRFAMDHEEPISRDESDIKKVFNSLPVGLLALHPQSMR
IDSSFAKAAVRMMVGALRRVLGACDAWSAQAQFFSDAAASCWDEPSDAASDFSMEFVREI
RISATAALAGGFERPEPSLLAEFAFLNLVSNPNGGNKWRQVGHILGRSVRLHTIVWPGGR
LVAHGQSSGARTIFRIVTALAPPFVMEGELDEDGQCLRGLPCHRPQTSDRDNLTLVFNEL
ERDSDQTTTDFFFPTPKPSTIWKMATHCCYGFAMDLLENIAEELEFDFHLYIVDDGLYGS
RKLVKPFRNFNEDKNNDKKHRSSDQSQAKHRDDDFIDIDKNEYNKQNSLTGDGDSDDNSD
IWKWNGIIGDLVSGAAHMSFAALSVSAARAEVVDFSQPYFFSGISILAAPNQRPDIPLLA
FLLPFSPELWIAIFTSLNVTAIAVAIYEWLSPFGLNPWGRQRSKNFSISSALWVMWGLLC
GHLVAFKAPKSWPNKFLINVWGGFSVIFVASYTANIAALIAGLFFHNAVDDYQGRGNWLS
LRVGTAKSSVAEYYIQRNNPLWAQQMRRFALHNIEEGIERLRNGSLDLLIADSPVLDYYR
ATDHGCKLQRVGDHALTKDIYAIGMSKGFPLKDSISAVIAKYSSNGYMDILTEKWYGALP
CFKLSPDYGIQPKPLGVAAVAGVFILLGVGMIVGCLILILEHLFYKYTLPILRHQPKGTI
WRSRNIMFFSQKLYRFINCVELVSPHHAARELVNTIRQGHFTSLFQKSVKRKEHEQRRRR
KSKAQFFEMIQEIRRVQQGRDLSLDSIKENAVVETSELSEDVTETKFLSPSPDVSSHSPR
RSRSPRQYRSPRSKRKRCSLAGLNVRRFSTDSVLGSDSASIYEKTSINIGRRLSRDVSFL
TNSPPDINTRLRTPSPMVRRPEGSSTRSYQDMSDSSPNYLAIDAPSHRASVEIMVTQESE
ISSAPPYNRVSPMGARSELSRLSEEELIRLWRSSEREVREALLAALQERRASLEPKQEPG