DPGLEAN00280 in OGS1.0

New model in OGS2.0DPOGS208171 
Genomic Positionscaffold896:- 8637-10202
See gene structure
CDS Length1566
Paired RNAseq reads  1333
Single RNAseq reads  3284
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA010259 (0.0)
Best Drosophila hit  CG7878 (5e-157)
Best Human hitprobable ATP-dependent RNA helicase DDX43 (7e-147)
Best NR hit (blastp)  DEAD box ATP-dependent RNA helicase [Aedes aegypti] (0.0)
Best NR hit (blastx)  DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus] (0.0)
GeneOntology terms


  
GO:0004004 ATP-dependent RNA helicase activity
GO:0004386 helicase activity
GO:0003723 RNA binding
GO:0005524 ATP binding
InterPro families



  
IPR014001 DEAD-like helicase
IPR001650 Helicase, C-terminal
IPR014014 RNA helicase, DEAD-box type, Q motif
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site
Orthology groupMCL12393

Nucleotide sequence:

ATGATAAATAAACTGATCGAGGATCGTAAACCGCCAACGAGGGAACATTTTAACAACAGT
GACACTGGAAGTGGTTCTAATGATTTTATGAAACAAAGTCAAGACGGTGTTGAGATTATT
GATTGGGATAAATTAAATGCTGCACATGACGAAGAGCAAAAAAAGAGATGGGATAGCTTA
CCTCCAATCATTAAAGATTTCTATAAGGAAGATCCCACTGTGGCCGGTATGACCCCAGCA
GATGTAACTCGCTGGAGGTTGGCTAACCATGACATTCAAGTAAAAAGAACATTTGATGAC
AAACCAGAGCTCCGTCCCATTCCCAATCCTGTTTTAACATTTGAACAGGCATTTCATCAA
TATCCAGAAATTTTGGAAGAAATTTATAAGCAAGGCTTTAAGCAACCATCTCCAATTCAG
AGTCAAGCTTGGCCAATTTTGCTCAGGGGTGATGATATGATTGGTATAGCACAAACTGGA
ACTGGGAAGACATTAGCTTTTCTGTTGCCTGCTTTAATACATATTGATGGACAAACCATT
CCGAGGGAAGAGAGAGAAGGTCCAACTGTATTAATATTAGCACCAACTCGGGAACTCGCT
CTGCAGATTGAGAAGGAAACATTAAAATACCAATACAAGGGAATAACTTCTGTCTGCCTA
TACGGCGGTGGAGATAGAAAGGAACAAATAAAAATGTGTAAAGGTGGTGTAGATATTGTC
ATTGCTACACCAGGAAGATTGAATGATCTTGTCTTGGCTCGTCATCTGAATATAATAAAT
TTTTCATACATCGTTCTTGATGAAGCAGACAGAATGTTGGATATGGGTTTTGAACCACAA
ATCAGAAAGTCCTTATATGATGTGAGACCAGACCGCCAAACTGTTATGACATCTGCCACT
TGGCCTGCAGGTGTACGTCGTCTAGCCGAGTCATATATGAAAGATCCAATACAGGTAAAT
GTAGGATCTTTAGACCTTGCAGCTGTACACACTGTAACTCAGAAAATTGTGTTCCTCGAG
GAAGATGACAAGGAGGCAGCTCTTTTTGAATTCATTCAAAACATGGATAAAAATGATAAA
GTCATCATATTCTGTGGGAAGAAAGCTACAGCCAGGCATATTTCGACGGAACTCTGCTTA
AAAGGCATTGAGTGTCAATCTCTTCATGGGGATAGGGAGCAAATTGACCGGGAAGCTGCT
TTGGAAGAAATGGTTGATGGCACAGTTAATATTCTAGTAGCTACTGATGTAGCTTCTAGG
GGCATTGATATAAAAGACTTAACACATGTTGTCAACCTGGATTTCCCCCGTCACATTGAA
GAGTATGTCCACAGAGTTGGTAGAACTGGAAGAGCTGGAAAGACAGGCATATCTCTGTCT
TTCATAACAAGACAGGACTGGGCTCACGCTCAGGATTTGATAAAAATCTTAGAAGAAGCT
AATCAAGAAATTCCAGATGAGTTGTTATCTATGGCTAACAGATTTGAGGCTATGAAAATT
CGTAGGGAACAAGAGGGTGGGGATAGAAGGGGCCGAGGTGGAAGGGGTAGGAGGGGTAGA
TACTGA

Protein sequence:

MINKLIEDRKPPTREHFNNSDTGSGSNDFMKQSQDGVEIIDWDKLNAAHDEEQKKRWDSL
PPIIKDFYKEDPTVAGMTPADVTRWRLANHDIQVKRTFDDKPELRPIPNPVLTFEQAFHQ
YPEILEEIYKQGFKQPSPIQSQAWPILLRGDDMIGIAQTGTGKTLAFLLPALIHIDGQTI
PREEREGPTVLILAPTRELALQIEKETLKYQYKGITSVCLYGGGDRKEQIKMCKGGVDIV
IATPGRLNDLVLARHLNIINFSYIVLDEADRMLDMGFEPQIRKSLYDVRPDRQTVMTSAT
WPAGVRRLAESYMKDPIQVNVGSLDLAAVHTVTQKIVFLEEDDKEAALFEFIQNMDKNDK
VIIFCGKKATARHISTELCLKGIECQSLHGDREQIDREAALEEMVDGTVNILVATDVASR
GIDIKDLTHVVNLDFPRHIEEYVHRVGRTGRAGKTGISLSFITRQDWAHAQDLIKILEEA
NQEIPDELLSMANRFEAMKIRREQEGGDRRGRGGRGRRGRY